Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SEMA4DQ92854 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA4DQ92854 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SEMA4DQ92854 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SEMA4DQ92854 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.9■□□□□ 0.3
SEMA4DQ92854 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA4DQ92854 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA4DQ92854 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.9■□□□□ 0.3
SEMA4DQ92854 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
SEMA4DQ92854 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SEMA4DQ92854 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA4DQ92854 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA4DQ92854 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA4DQ92854 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA4DQ92854 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA4DQ92854 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.9■□□□□ 0.3
SEMA4DQ92854 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.89■□□□□ 0.3
SEMA4DQ92854 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SEMA4DQ92854 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SEMA4DQ92854 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 TOMM22P5-201ENST00000416399 439 ntBASIC16.89■□□□□ 0.29
SEMA4DQ92854 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 AC135586.1-201ENST00000539323 574 ntBASIC16.89■□□□□ 0.29
SEMA4DQ92854 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 AC092337.1-201ENST00000568699 1129 ntBASIC16.89■□□□□ 0.29
SEMA4DQ92854 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.89■□□□□ 0.29
SEMA4DQ92854 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA4DQ92854 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA4DQ92854 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 DBET-201ENST00000630918 3363 ntBASIC16.88■□□□□ 0.29
SEMA4DQ92854 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 AC084364.1-201ENST00000551967 1556 ntBASIC16.88■□□□□ 0.29
SEMA4DQ92854 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA4DQ92854 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA4DQ92854 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms