Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 KRT18P43-201ENST00000469825 1281 ntBASIC16.79■□□□□ 0.28
LMO3Q8TAP4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 FAM8A3P-201ENST00000427218 844 ntBASIC16.78■□□□□ 0.28
LMO3Q8TAP4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 SRD5A3P1-201ENST00000603021 949 ntBASIC16.78■□□□□ 0.28
LMO3Q8TAP4 AC025181.2-201ENST00000606994 802 ntBASIC16.78■□□□□ 0.28
LMO3Q8TAP4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMO3Q8TAP4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 AL158212.4-201ENST00000624062 1286 ntBASIC16.77■□□□□ 0.28
LMO3Q8TAP4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO3Q8TAP4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 LINC00528-201ENST00000600723 2160 ntBASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms