Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 AF186996.4-201ENST00000467186 377 ntBASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 AL031008.1-201ENST00000619963 541 ntBASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 AC107918.4-202ENST00000641623 219 ntBASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
RFWD2Q8NHY2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 ZBED1P1-201ENST00000502364 1930 ntBASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 FAM185BP-201ENST00000443595 716 ntBASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 IGHV3-65-201ENST00000523210 341 ntBASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 CICP14-201ENST00000629111 2732 ntBASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 AC097376.2-205ENST00000610159 5334 ntBASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RFWD2Q8NHY2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 LINC01230-201ENST00000625222 3017 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms