Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.35□□□□□ -0.43
C3orf56Q8N813 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 AL512652.2-201ENST00000625156 1716 ntBASIC12.34□□□□□ -0.43
C3orf56Q8N813 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 AC004987.2-201ENST00000395959 1148 ntBASIC12.34□□□□□ -0.43
C3orf56Q8N813 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 AC253536.4-201ENST00000440539 267 ntBASIC12.34□□□□□ -0.43
C3orf56Q8N813 MTX1P1-201ENST00000440904 838 ntBASIC12.34□□□□□ -0.43
C3orf56Q8N813 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 AC009113.1-201ENST00000570267 2443 ntBASIC12.34□□□□□ -0.43
C3orf56Q8N813 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
C3orf56Q8N813 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
C3orf56Q8N813 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
C3orf56Q8N813 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
C3orf56Q8N813 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
C3orf56Q8N813 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.33□□□□□ -0.43
C3orf56Q8N813 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
C3orf56Q8N813 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.33□□□□□ -0.44
C3orf56Q8N813 PCDH8P1-201ENST00000428983 2773 ntBASIC12.33□□□□□ -0.44
C3orf56Q8N813 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 RN7SL769P-201ENST00000469386 295 ntBASIC12.33□□□□□ -0.44
C3orf56Q8N813 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms