Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CROCCP3Q8IVE0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 AC131902.2-201ENST00000566892 2172 ntBASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 AC145285.6-201ENST00000604632 637 ntBASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 AC131009.4-201ENST00000624048 1740 ntBASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 INTS4P1-203ENST00000641008 3683 ntBASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CROCCP3Q8IVE0 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
CROCCP3Q8IVE0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.33□□□□□ -0.11
CROCCP3Q8IVE0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.33□□□□□ -0.11
CROCCP3Q8IVE0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CROCCP3Q8IVE0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CROCCP3Q8IVE0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CROCCP3Q8IVE0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.11
CROCCP3Q8IVE0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
CROCCP3Q8IVE0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CROCCP3Q8IVE0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CROCCP3Q8IVE0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 AC152010.1-201ENST00000415779 2006 ntBASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 AC011477.6-201ENST00000604980 1927 ntBASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CROCCP3Q8IVE0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms