Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 AC125604.1-201ENST00000496255 707 ntBASIC19.41■□□□□ 0.7
COL23A1Q86Y22 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 MIR4783-201ENST00000580343 82 ntBASIC19.41■□□□□ 0.7
COL23A1Q86Y22 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 ALOX12P2-203ENST00000570921 1945 ntBASIC19.41■□□□□ 0.7
COL23A1Q86Y22 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL23A1Q86Y22 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 AC007787.1-201ENST00000588095 1583 ntBASIC19.4■□□□□ 0.7
COL23A1Q86Y22 MVK-214ENST00000629016 1591 ntTSL 5 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 AC106820.2-201ENST00000563775 3264 ntBASIC19.4■□□□□ 0.7
COL23A1Q86Y22 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 AL136309.1-201ENST00000403917 691 ntBASIC19.4■□□□□ 0.7
COL23A1Q86Y22 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.4■□□□□ 0.7
COL23A1Q86Y22 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 AL158070.2-201ENST00000623713 1621 ntBASIC19.4■□□□□ 0.7
COL23A1Q86Y22 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL23A1Q86Y22 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL23A1Q86Y22 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL23A1Q86Y22 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.39■□□□□ 0.7
COL23A1Q86Y22 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.39■□□□□ 0.7
COL23A1Q86Y22 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL23A1Q86Y22 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 AL353637.1-201ENST00000451571 732 ntBASIC19.39■□□□□ 0.69
COL23A1Q86Y22 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 PTK2-225ENST00000520892 571 ntTSL 4 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 AC242376.1-201ENST00000559033 726 ntBASIC19.39■□□□□ 0.69
COL23A1Q86Y22 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 AC005324.6-201ENST00000587972 613 ntBASIC19.39■□□□□ 0.69
COL23A1Q86Y22 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 AC092171.5-201ENST00000608012 942 ntBASIC19.39■□□□□ 0.69
COL23A1Q86Y22 AL805961.1-201ENST00000642026 753 ntBASIC19.39■□□□□ 0.69
COL23A1Q86Y22 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.39■□□□□ 0.69
COL23A1Q86Y22 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms