Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 AC092127.1-201ENST00000567093 3455 ntBASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 AC087481.3-201ENST00000602886 1894 ntBASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 KRT18P13-201ENST00000400056 1290 ntBASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 AC069262.1-201ENST00000539058 672 ntBASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 MIR6080-201ENST00000617359 66 ntBASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 AC127383.1-201ENST00000444697 1800 ntBASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST2H3AQ71DI3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 DNAJB3-202ENST00000449667 1266 ntBASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 AL079307.3-201ENST00000556114 283 ntBASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 SNHG9-202ENST00000564014 471 ntBASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 AL607033.1-201ENST00000623900 1599 ntBASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST2H3AQ71DI3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms