Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 IGHV3-72-202ENST00000621503 303 ntBASIC18.66■□□□□ 0.58
CTR9Q6PD62 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.66■□□□□ 0.58
CTR9Q6PD62 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.66■□□□□ 0.58
CTR9Q6PD62 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTR9Q6PD62 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 AC132938.2-201ENST00000579188 680 ntBASIC18.65■□□□□ 0.58
CTR9Q6PD62 BRI3BPP1-201ENST00000594224 787 ntBASIC18.65■□□□□ 0.58
CTR9Q6PD62 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 AC000095.1-201ENST00000603208 874 ntBASIC18.65■□□□□ 0.58
CTR9Q6PD62 AL591163.1-201ENST00000641757 987 ntBASIC18.65■□□□□ 0.58
CTR9Q6PD62 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTR9Q6PD62 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.65■□□□□ 0.58
CTR9Q6PD62 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTR9Q6PD62 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.64■□□□□ 0.58
CTR9Q6PD62 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTR9Q6PD62 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
CTR9Q6PD62 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
CTR9Q6PD62 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTR9Q6PD62 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTR9Q6PD62 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTR9Q6PD62 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.64■□□□□ 0.57
CTR9Q6PD62 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTR9Q6PD62 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.64■□□□□ 0.57
CTR9Q6PD62 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTR9Q6PD62 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms