Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 AL353135.1-201ENST00000606729 504 ntBASIC11.96□□□□□ -0.49
MRPL54Q6P161 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.96□□□□□ -0.5
MRPL54Q6P161 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.96□□□□□ -0.5
MRPL54Q6P161 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.5
MRPL54Q6P161 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.96□□□□□ -0.5
MRPL54Q6P161 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.96□□□□□ -0.5
MRPL54Q6P161 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.96□□□□□ -0.5
MRPL54Q6P161 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL54Q6P161 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 AC136759.1-202ENST00000530858 2194 ntBASIC11.95□□□□□ -0.5
MRPL54Q6P161 LINC01568-207ENST00000641790 1380 ntBASIC11.95□□□□□ -0.5
MRPL54Q6P161 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 PRORSD1P-201ENST00000295112 541 ntBASIC11.95□□□□□ -0.5
MRPL54Q6P161 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 AC087641.1-201ENST00000557561 1021 ntBASIC11.95□□□□□ -0.5
MRPL54Q6P161 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 REXO1L3P-201ENST00000622202 1288 ntBASIC11.95□□□□□ -0.5
MRPL54Q6P161 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 TP73-AS1-210ENST00000637775 1455 ntBASIC11.95□□□□□ -0.5
MRPL54Q6P161 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL54Q6P161 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL54Q6P161 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
MRPL54Q6P161 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL54Q6P161 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms