Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.71□□□□□ -0.05
REEP3Q6NUK4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.71□□□□□ -0.05
REEP3Q6NUK4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
REEP3Q6NUK4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
REEP3Q6NUK4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
REEP3Q6NUK4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.71□□□□□ -0.05
REEP3Q6NUK4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
REEP3Q6NUK4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 AC136604.1-201ENST00000418535 575 ntBASIC14.7□□□□□ -0.06
REEP3Q6NUK4 AC004832.2-201ENST00000426397 482 ntBASIC14.7□□□□□ -0.06
REEP3Q6NUK4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 AC069335.1-201ENST00000489972 472 ntBASIC14.7□□□□□ -0.06
REEP3Q6NUK4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
REEP3Q6NUK4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 LINC01101-201ENST00000622953 1884 ntBASIC14.69□□□□□ -0.06
REEP3Q6NUK4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 MYO15B-237ENST00000642007 4893 ntBASIC14.69□□□□□ -0.06
REEP3Q6NUK4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 HTR5BP-201ENST00000430851 1154 ntBASIC14.69□□□□□ -0.06
REEP3Q6NUK4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.69□□□□□ -0.06
REEP3Q6NUK4 KRT18P58-201ENST00000527480 1120 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms