Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.43■□□□□ 0.22
TTC39BQ5VTQ0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 AC114501.2-201ENST00000439631 535 ntBASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 TERF1P3-201ENST00000505638 1227 ntBASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 AC025048.3-201ENST00000590609 569 ntBASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 AC008738.7-201ENST00000609744 511 ntBASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 AC005702.4-201ENST00000618393 416 ntBASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 REXO1L1P-202ENST00000608646 1974 ntBASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC39BQ5VTQ0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AC006058.4-201ENST00000624016 1670 ntBASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AZGP1P1-201ENST00000411909 902 ntBASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AC002472.2-201ENST00000442739 958 ntBASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AC135586.1-201ENST00000539323 574 ntBASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AL450472.2-201ENST00000603663 1156 ntBASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AC008761.3-201ENST00000624803 892 ntBASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC39BQ5VTQ0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 FLJ16779-201ENST00000612722 7638 ntBASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms