Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AC096734.2-201ENST00000562054 433 ntBASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AC024267.1-201ENST00000582320 895 ntBASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 IFNL4P1-201ENST00000607083 540 ntBASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AC007064.4-201ENST00000637740 555 ntBASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 KRT18P67-201ENST00000432816 1264 ntBASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 RHOQP3-201ENST00000437982 621 ntBASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 AC092910.1-201ENST00000482027 1129 ntBASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 AC061975.2-201ENST00000581722 295 ntBASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 AC023141.13-201ENST00000604991 943 ntBASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 AC010507.1-201ENST00000633895 436 ntBASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms