Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN20Q4JDL3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 BASP1P1-201ENST00000430708 665 ntBASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 AC004790.1-201ENST00000612686 536 ntBASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 BTBD7P1-201ENST00000447253 1453 ntBASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 AL109954.1-202ENST00000564051 2148 ntBASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN20Q4JDL3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 AC011270.2-201ENST00000624293 2550 ntBASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 FAM8A3P-201ENST00000427218 844 ntBASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 AL589987.1-201ENST00000453380 819 ntBASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 AC092337.1-201ENST00000568699 1129 ntBASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 AC015910.1-201ENST00000579400 975 ntBASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN20Q4JDL3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 AC084364.1-201ENST00000551967 1556 ntBASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms