Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VBP1P61758 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VBP1P61758 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.18□□□□□ -0.14
VBP1P61758 HCG4-201ENST00000418983 998 ntBASIC14.18□□□□□ -0.14
VBP1P61758 FAM8A3P-201ENST00000427218 844 ntBASIC14.18□□□□□ -0.14
VBP1P61758 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.18□□□□□ -0.14
VBP1P61758 TSPY20P-201ENST00000450910 630 ntBASIC14.18□□□□□ -0.14
VBP1P61758 AC245100.5-201ENST00000452108 331 ntBASIC14.18□□□□□ -0.14
VBP1P61758 HOMER2P1-201ENST00000455653 964 ntBASIC14.18□□□□□ -0.14
VBP1P61758 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.18□□□□□ -0.14
VBP1P61758 AC107918.2-201ENST00000530817 355 ntBASIC14.18□□□□□ -0.14
VBP1P61758 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.18□□□□□ -0.14
VBP1P61758 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.18□□□□□ -0.14
VBP1P61758 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.18□□□□□ -0.14
VBP1P61758 TMEM191A-211ENST00000637163 1067 ntBASIC14.18□□□□□ -0.14
VBP1P61758 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 AC099521.3-201ENST00000624251 2938 ntBASIC14.18□□□□□ -0.14
VBP1P61758 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.18□□□□□ -0.14
VBP1P61758 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.18□□□□□ -0.14
VBP1P61758 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 AP001282.1-201ENST00000531301 1499 ntBASIC14.18□□□□□ -0.14
VBP1P61758 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VBP1P61758 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VBP1P61758 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VBP1P61758 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.18□□□□□ -0.14
VBP1P61758 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
VBP1P61758 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.17□□□□□ -0.14
VBP1P61758 MTHFR-210ENST00000641407 2387 ntBASIC14.17□□□□□ -0.14
VBP1P61758 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VBP1P61758 AC018892.3-201ENST00000623986 2499 ntBASIC14.17□□□□□ -0.14
VBP1P61758 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VBP1P61758 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VBP1P61758 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.17□□□□□ -0.14
VBP1P61758 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.17□□□□□ -0.14
VBP1P61758 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.17□□□□□ -0.14
VBP1P61758 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.17□□□□□ -0.14
VBP1P61758 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.17□□□□□ -0.14
VBP1P61758 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.17□□□□□ -0.14
VBP1P61758 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.17□□□□□ -0.14
VBP1P61758 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.17□□□□□ -0.14
VBP1P61758 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.17□□□□□ -0.14
VBP1P61758 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.17□□□□□ -0.14
VBP1P61758 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.17□□□□□ -0.14
VBP1P61758 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.17□□□□□ -0.14
VBP1P61758 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 AC092135.3-201ENST00000624151 1846 ntBASIC14.17□□□□□ -0.14
VBP1P61758 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.17□□□□□ -0.14
VBP1P61758 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.17□□□□□ -0.14
VBP1P61758 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VBP1P61758 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VBP1P61758 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VBP1P61758 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VBP1P61758 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.16□□□□□ -0.14
VBP1P61758 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms