Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S2P59780 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
AP3S2P59780 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.59□□□□□ -0.23
AP3S2P59780 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP3S2P59780 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.58□□□□□ -0.23
AP3S2P59780 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.58□□□□□ -0.23
AP3S2P59780 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
AP3S2P59780 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
AP3S2P59780 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
AP3S2P59780 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP3S2P59780 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.58□□□□□ -0.24
AP3S2P59780 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.58□□□□□ -0.24
AP3S2P59780 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.58□□□□□ -0.24
AP3S2P59780 AC093724.1-201ENST00000448659 1027 ntBASIC13.58□□□□□ -0.24
AP3S2P59780 AL671277.2-201ENST00000458060 996 ntBASIC13.58□□□□□ -0.24
AP3S2P59780 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.58□□□□□ -0.24
AP3S2P59780 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.58□□□□□ -0.24
AP3S2P59780 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.58□□□□□ -0.24
AP3S2P59780 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
AP3S2P59780 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 BX640514.1-201ENST00000583223 1918 ntBASIC13.58□□□□□ -0.24
AP3S2P59780 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 AC012569.1-201ENST00000591191 1524 ntBASIC13.58□□□□□ -0.24
AP3S2P59780 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
AP3S2P59780 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.58□□□□□ -0.24
AP3S2P59780 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S2P59780 REXO1L1P-202ENST00000608646 1974 ntBASIC13.58□□□□□ -0.24
AP3S2P59780 AC134407.2-201ENST00000625089 1978 ntBASIC13.58□□□□□ -0.24
AP3S2P59780 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S2P59780 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.58□□□□□ -0.24
AP3S2P59780 WASH3P-207ENST00000560956 1394 ntBASIC13.58□□□□□ -0.24
AP3S2P59780 FO538757.1-201ENST00000623083 1397 ntBASIC13.58□□□□□ -0.24
AP3S2P59780 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S2P59780 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S2P59780 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S2P59780 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S2P59780 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S2P59780 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 AC136759.1-202ENST00000530858 2194 ntBASIC13.57□□□□□ -0.24
AP3S2P59780 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S2P59780 PTCHD3P3-201ENST00000403073 906 ntBASIC13.57□□□□□ -0.24
AP3S2P59780 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
AP3S2P59780 AK4P3-201ENST00000418260 669 ntBASIC13.57□□□□□ -0.24
AP3S2P59780 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.57□□□□□ -0.24
AP3S2P59780 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S2P59780 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.57□□□□□ -0.24
AP3S2P59780 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
AP3S2P59780 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S2P59780 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S2P59780 AC139887.3-201ENST00000568585 713 ntBASIC13.57□□□□□ -0.24
AP3S2P59780 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.57□□□□□ -0.24
AP3S2P59780 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms