Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN8P56748 AC013726.1-201ENST00000563747 2285 ntBASIC14.99□□□□□ -0.01
CLDN8P56748 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN8P56748 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN8P56748 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN8P56748 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLDN8P56748 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLDN8P56748 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN8P56748 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN8P56748 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN8P56748 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLDN8P56748 CICP23-201ENST00000605013 2741 ntBASIC14.98□□□□□ -0.01
CLDN8P56748 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN8P56748 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN8P56748 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLDN8P56748 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN8P56748 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 AC005237.2-201ENST00000434368 219 ntBASIC14.98□□□□□ -0.01
CLDN8P56748 ALG1L5P-201ENST00000482043 771 ntBASIC14.98□□□□□ -0.01
CLDN8P56748 POLD2P1-201ENST00000511220 997 ntBASIC14.98□□□□□ -0.01
CLDN8P56748 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN8P56748 AC018529.1-201ENST00000613063 361 ntBASIC14.98□□□□□ -0.01
CLDN8P56748 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CLDN8P56748 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLDN8P56748 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN8P56748 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN8P56748 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN8P56748 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CLDN8P56748 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN8P56748 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN8P56748 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN8P56748 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLDN8P56748 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLDN8P56748 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 HIST3H2BA-201ENST00000436555 524 ntBASIC14.97□□□□□ -0.01
CLDN8P56748 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN8P56748 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN8P56748 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN8P56748 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN8P56748 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN8P56748 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLDN8P56748 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLDN8P56748 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN8P56748 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN8P56748 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN8P56748 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN8P56748 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN8P56748 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CLDN8P56748 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN8P56748 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN8P56748 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN8P56748 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN8P56748 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN8P56748 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN8P56748 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN8P56748 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN8P56748 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms