Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.04□□□□□ -0.16
GFRA1P56159 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
GFRA1P56159 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GFRA1P56159 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GFRA1P56159 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
GFRA1P56159 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
GFRA1P56159 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
GFRA1P56159 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GFRA1P56159 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
GFRA1P56159 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 AL162726.2-201ENST00000438986 1017 ntBASIC14.04□□□□□ -0.16
GFRA1P56159 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.04□□□□□ -0.16
GFRA1P56159 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.04□□□□□ -0.16
GFRA1P56159 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.04□□□□□ -0.16
GFRA1P56159 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
GFRA1P56159 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.04□□□□□ -0.16
GFRA1P56159 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.04□□□□□ -0.16
GFRA1P56159 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.04□□□□□ -0.16
GFRA1P56159 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.04□□□□□ -0.16
GFRA1P56159 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.04□□□□□ -0.16
GFRA1P56159 DRD5P1-201ENST00000456605 1438 ntBASIC14.04□□□□□ -0.16
GFRA1P56159 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 PKD1P5-201ENST00000532415 10291 ntBASIC14.04□□□□□ -0.16
GFRA1P56159 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
GFRA1P56159 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.04□□□□□ -0.16
GFRA1P56159 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GFRA1P56159 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GFRA1P56159 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.03□□□□□ -0.16
GFRA1P56159 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.03□□□□□ -0.16
GFRA1P56159 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.03□□□□□ -0.16
GFRA1P56159 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.03□□□□□ -0.16
GFRA1P56159 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
GFRA1P56159 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GFRA1P56159 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 AC092127.1-201ENST00000567093 3455 ntBASIC14.03□□□□□ -0.16
GFRA1P56159 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.03□□□□□ -0.16
GFRA1P56159 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.03□□□□□ -0.16
GFRA1P56159 SOCS2P1-201ENST00000417727 557 ntBASIC14.03□□□□□ -0.16
GFRA1P56159 GAPDHP40-201ENST00000505218 1006 ntBASIC14.03□□□□□ -0.16
GFRA1P56159 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.03□□□□□ -0.16
GFRA1P56159 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.03□□□□□ -0.16
GFRA1P56159 ENPP7P5-201ENST00000541031 1031 ntBASIC14.03□□□□□ -0.16
GFRA1P56159 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
GFRA1P56159 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.03□□□□□ -0.16
GFRA1P56159 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
GFRA1P56159 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.03□□□□□ -0.16
GFRA1P56159 RPSAP52-203ENST00000622976 1023 ntBASIC14.03□□□□□ -0.16
GFRA1P56159 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 KRT8P22-201ENST00000562317 1415 ntBASIC14.03□□□□□ -0.16
GFRA1P56159 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.03□□□□□ -0.16
GFRA1P56159 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.03□□□□□ -0.16
GFRA1P56159 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GFRA1P56159 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.03□□□□□ -0.16
GFRA1P56159 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GFRA1P56159 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GFRA1P56159 CICP6-201ENST00000457191 2729 ntBASIC14.03□□□□□ -0.16
GFRA1P56159 CICP13-201ENST00000422015 2789 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms