Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC25A1P53007 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14□□□□□ -0.17
SLC25A1P53007 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14□□□□□ -0.17
SLC25A1P53007 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC25A1P53007 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SLC25A1P53007 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
SLC25A1P53007 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC25A1P53007 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC25A1P53007 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC25A1P53007 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SLC25A1P53007 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 LINC02228-204ENST00000642115 2962 ntBASIC13.99□□□□□ -0.17
SLC25A1P53007 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 WASH3P-207ENST00000560956 1394 ntBASIC13.99□□□□□ -0.17
SLC25A1P53007 FO538757.1-201ENST00000623083 1397 ntBASIC13.99□□□□□ -0.17
SLC25A1P53007 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
SLC25A1P53007 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SLC25A1P53007 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SLC25A1P53007 HIST3H2BA-201ENST00000436555 524 ntBASIC13.99□□□□□ -0.17
SLC25A1P53007 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC25A1P53007 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC25A1P53007 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC25A1P53007 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 CICP23-201ENST00000605013 2741 ntBASIC13.99□□□□□ -0.17
SLC25A1P53007 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC25A1P53007 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 ELL2P1-201ENST00000413990 1906 ntBASIC13.99□□□□□ -0.17
SLC25A1P53007 AC084364.1-201ENST00000551967 1556 ntBASIC13.99□□□□□ -0.17
SLC25A1P53007 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC25A1P53007 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SLC25A1P53007 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC25A1P53007 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC25A1P53007 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SLC25A1P53007 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC25A1P53007 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SLC25A1P53007 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SLC25A1P53007 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
SLC25A1P53007 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.98□□□□□ -0.17
SLC25A1P53007 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SLC25A1P53007 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.98□□□□□ -0.17
SLC25A1P53007 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SLC25A1P53007 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SLC25A1P53007 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
SLC25A1P53007 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC25A1P53007 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SLC25A1P53007 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SLC25A1P53007 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms