Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 NHP2P1-201ENST00000335274 462 ntBASIC17.34■□□□□ 0.37
LBX1P52954 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LBX1P52954 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LBX1P52954 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.34■□□□□ 0.37
LBX1P52954 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LBX1P52954 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LBX1P52954 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.34■□□□□ 0.37
LBX1P52954 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.34■□□□□ 0.37
LBX1P52954 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.34■□□□□ 0.37
LBX1P52954 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.34■□□□□ 0.37
LBX1P52954 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LBX1P52954 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LBX1P52954 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LBX1P52954 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC17.34■□□□□ 0.37
LBX1P52954 PHBP15-201ENST00000574228 665 ntBASIC17.34■□□□□ 0.37
LBX1P52954 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.34■□□□□ 0.37
LBX1P52954 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.34■□□□□ 0.37
LBX1P52954 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
LBX1P52954 AC104581.1-202ENST00000635932 2618 ntBASIC17.34■□□□□ 0.37
LBX1P52954 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
LBX1P52954 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.33■□□□□ 0.37
LBX1P52954 AL603756.1-201ENST00000606511 2163 ntBASIC17.33■□□□□ 0.37
LBX1P52954 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.33■□□□□ 0.37
LBX1P52954 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
LBX1P52954 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.33■□□□□ 0.37
LBX1P52954 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
LBX1P52954 GGT3P-204ENST00000453783 1664 ntBASIC17.33■□□□□ 0.37
LBX1P52954 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LBX1P52954 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LBX1P52954 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.33■□□□□ 0.36
LBX1P52954 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.33■□□□□ 0.36
LBX1P52954 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LBX1P52954 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LBX1P52954 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
LBX1P52954 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.33■□□□□ 0.36
LBX1P52954 AL807761.2-201ENST00000422849 729 ntBASIC17.33■□□□□ 0.36
LBX1P52954 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LBX1P52954 RN7SL81P-201ENST00000493781 261 ntBASIC17.33■□□□□ 0.36
LBX1P52954 MRPL22P1-201ENST00000505398 616 ntBASIC17.33■□□□□ 0.36
LBX1P52954 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC17.33■□□□□ 0.36
LBX1P52954 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.33■□□□□ 0.36
LBX1P52954 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.33■□□□□ 0.36
LBX1P52954 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.33■□□□□ 0.36
LBX1P52954 AP001184.1-201ENST00000637936 376 ntBASIC17.33■□□□□ 0.36
LBX1P52954 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LBX1P52954 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.33■□□□□ 0.36
LBX1P52954 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.33■□□□□ 0.36
LBX1P52954 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LBX1P52954 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
LBX1P52954 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LBX1P52954 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LBX1P52954 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.33■□□□□ 0.36
LBX1P52954 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LBX1P52954 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LBX1P52954 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LBX1P52954 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.32■□□□□ 0.36
LBX1P52954 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
LBX1P52954 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.32■□□□□ 0.36
LBX1P52954 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LBX1P52954 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LBX1P52954 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 MIR557-201ENST00000385239 98 ntBASIC17.32■□□□□ 0.36
LBX1P52954 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 PGAM1P12-201ENST00000505622 748 ntBASIC17.32■□□□□ 0.36
LBX1P52954 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.32■□□□□ 0.36
LBX1P52954 AP000911.2-201ENST00000534330 502 ntBASIC17.32■□□□□ 0.36
LBX1P52954 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.32■□□□□ 0.36
LBX1P52954 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LBX1P52954 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.32■□□□□ 0.36
LBX1P52954 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LBX1P52954 AC005041.3-201ENST00000606287 649 ntBASIC17.32■□□□□ 0.36
LBX1P52954 MIR6125-201ENST00000618986 96 ntBASIC17.32■□□□□ 0.36
LBX1P52954 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LBX1P52954 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 SHC1P1-201ENST00000425230 1745 ntBASIC17.32■□□□□ 0.36
LBX1P52954 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms