Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCN2P51788 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCN2P51788 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 AC005622.1-201ENST00000636801 1703 ntBASIC15.34■□□□□ 0.05
CLCN2P51788 AC005912.2-201ENST00000619492 2400 ntBASIC15.34■□□□□ 0.05
CLCN2P51788 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
CLCN2P51788 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN2P51788 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN2P51788 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.33■□□□□ 0.05
CLCN2P51788 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CLCN2P51788 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN2P51788 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.33■□□□□ 0.05
CLCN2P51788 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CLCN2P51788 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN2P51788 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN2P51788 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCN2P51788 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLCN2P51788 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.33■□□□□ 0.04
CLCN2P51788 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.33■□□□□ 0.04
CLCN2P51788 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCN2P51788 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCN2P51788 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.33■□□□□ 0.04
CLCN2P51788 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCN2P51788 AC073389.1-201ENST00000595595 795 ntBASIC15.33■□□□□ 0.04
CLCN2P51788 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCN2P51788 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLCN2P51788 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLCN2P51788 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLCN2P51788 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CLCN2P51788 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCN2P51788 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCN2P51788 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCN2P51788 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CLCN2P51788 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
CLCN2P51788 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCN2P51788 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLCN2P51788 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CLCN2P51788 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCN2P51788 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCN2P51788 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCN2P51788 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CLCN2P51788 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CLCN2P51788 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 MIR346-201ENST00000362234 95 ntBASIC15.32■□□□□ 0.04
CLCN2P51788 AL139400.1-201ENST00000366220 510 ntBASIC15.32■□□□□ 0.04
CLCN2P51788 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 FAM58DP-201ENST00000428076 619 ntBASIC15.32■□□□□ 0.04
CLCN2P51788 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.32■□□□□ 0.04
CLCN2P51788 RBPMS2P1-201ENST00000437762 623 ntBASIC15.32■□□□□ 0.04
CLCN2P51788 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.32■□□□□ 0.04
CLCN2P51788 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.32■□□□□ 0.04
CLCN2P51788 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLCN2P51788 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 SLC25A39P2-201ENST00000537614 270 ntBASIC15.32■□□□□ 0.04
CLCN2P51788 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLCN2P51788 AL138918.1-201ENST00000568306 659 ntBASIC15.32■□□□□ 0.04
CLCN2P51788 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCN2P51788 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCN2P51788 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CLCN2P51788 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLCN2P51788 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLCN2P51788 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms