Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.71■□□□□ 0.43
USP11P51784 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.71■□□□□ 0.43
USP11P51784 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.71■□□□□ 0.43
USP11P51784 AC008494.3-201ENST00000606615 944 ntBASIC17.71■□□□□ 0.43
USP11P51784 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
USP11P51784 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
USP11P51784 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 AC007431.3-201ENST00000623221 587 ntBASIC17.71■□□□□ 0.43
USP11P51784 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.71■□□□□ 0.43
USP11P51784 AC025048.6-201ENST00000634326 1161 ntBASIC17.71■□□□□ 0.43
USP11P51784 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
USP11P51784 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.71■□□□□ 0.43
USP11P51784 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP11P51784 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.71■□□□□ 0.42
USP11P51784 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.71■□□□□ 0.42
USP11P51784 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
USP11P51784 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.71■□□□□ 0.42
USP11P51784 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.71■□□□□ 0.42
USP11P51784 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
USP11P51784 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.7■□□□□ 0.42
USP11P51784 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.7■□□□□ 0.42
USP11P51784 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.7■□□□□ 0.42
USP11P51784 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
USP11P51784 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
USP11P51784 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.7■□□□□ 0.42
USP11P51784 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
USP11P51784 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.7■□□□□ 0.42
USP11P51784 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.7■□□□□ 0.42
USP11P51784 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
USP11P51784 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 AL442647.2-201ENST00000429864 857 ntBASIC17.7■□□□□ 0.42
USP11P51784 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.7■□□□□ 0.42
USP11P51784 RPL13AP25-201ENST00000484130 612 ntBASIC17.7■□□□□ 0.42
USP11P51784 ELK1P1-201ENST00000485699 580 ntBASIC17.7■□□□□ 0.42
USP11P51784 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.7■□□□□ 0.42
USP11P51784 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.7■□□□□ 0.42
USP11P51784 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.7■□□□□ 0.42
USP11P51784 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.7■□□□□ 0.42
USP11P51784 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
USP11P51784 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
USP11P51784 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
USP11P51784 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
USP11P51784 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP11P51784 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
USP11P51784 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.69■□□□□ 0.42
USP11P51784 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.69■□□□□ 0.42
USP11P51784 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.69■□□□□ 0.42
USP11P51784 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.69■□□□□ 0.42
USP11P51784 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
USP11P51784 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.69■□□□□ 0.42
USP11P51784 DGCR5-201ENST00000399539 862 ntBASIC17.69■□□□□ 0.42
USP11P51784 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.69■□□□□ 0.42
USP11P51784 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.69■□□□□ 0.42
USP11P51784 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.69■□□□□ 0.42
USP11P51784 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.69■□□□□ 0.42
USP11P51784 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.69■□□□□ 0.42
USP11P51784 CTBP2P3-201ENST00000585629 1255 ntBASIC17.69■□□□□ 0.42
USP11P51784 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
USP11P51784 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.69■□□□□ 0.42
USP11P51784 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.69■□□□□ 0.42
USP11P51784 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.69■□□□□ 0.42
USP11P51784 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.69■□□□□ 0.42
USP11P51784 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms