Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.13■□□□□ 0.01
HLCSP50747 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLCSP50747 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 FOXO1B-201ENST00000504678 1527 ntBASIC15.12■□□□□ 0.01
HLCSP50747 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 LINC00528-201ENST00000600723 2160 ntBASIC15.12■□□□□ 0.01
HLCSP50747 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
HLCSP50747 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.12■□□□□ 0.01
HLCSP50747 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.12■□□□□ 0.01
HLCSP50747 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.12■□□□□ 0.01
HLCSP50747 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HLCSP50747 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HLCSP50747 HLA-H-201ENST00000383620 1096 ntBASIC15.12■□□□□ 0.01
HLCSP50747 MIR943-201ENST00000401286 94 ntBASIC15.12■□□□□ 0.01
HLCSP50747 RNA5SP421-201ENST00000516864 134 ntBASIC15.12■□□□□ 0.01
HLCSP50747 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.12■□□□□ 0.01
HLCSP50747 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.12■□□□□ 0.01
HLCSP50747 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.12■□□□□ 0.01
HLCSP50747 SPCS2P1-201ENST00000561636 679 ntBASIC15.12■□□□□ 0.01
HLCSP50747 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.12■□□□□ 0.01
HLCSP50747 MIR4453-201ENST00000584019 89 ntBASIC15.12■□□□□ 0.01
HLCSP50747 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.12■□□□□ 0.01
HLCSP50747 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.12■□□□□ 0.01
HLCSP50747 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HLCSP50747 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.12■□□□□ 0.01
HLCSP50747 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.12■□□□□ 0.01
HLCSP50747 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.12■□□□□ 0.01
HLCSP50747 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLCSP50747 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 GPAA1P2-202ENST00000606848 1787 ntBASIC15.11■□□□□ 0.01
HLCSP50747 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HLCSP50747 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
HLCSP50747 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 FAM220BP-201ENST00000377689 816 ntBASIC15.11■□□□□ 0.01
HLCSP50747 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.11■□□□□ 0.01
HLCSP50747 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.11■□□□□ 0.01
HLCSP50747 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.11■□□□□ 0.01
HLCSP50747 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.11■□□□□ 0.01
HLCSP50747 AC092364.2-202ENST00000597012 1073 ntBASIC15.11■□□□□ 0.01
HLCSP50747 AL096865.1-201ENST00000606796 927 ntBASIC15.11■□□□□ 0.01
HLCSP50747 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 LINC01144-201ENST00000626198 1710 ntBASIC15.11■□□□□ 0.01
HLCSP50747 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLCSP50747 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLCSP50747 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.11■□□□□ 0.01
HLCSP50747 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLCSP50747 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
HLCSP50747 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLCSP50747 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLCSP50747 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HLCSP50747 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLCSP50747 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLCSP50747 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.1■□□□□ 0.01
HLCSP50747 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLCSP50747 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
HLCSP50747 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms