Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LHX2P50458 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.99□□□□□ -0.17
LHX2P50458 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 DRD5P1-201ENST00000456605 1438 ntBASIC13.99□□□□□ -0.17
LHX2P50458 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.99□□□□□ -0.17
LHX2P50458 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
LHX2P50458 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 AC092127.1-201ENST00000567093 3455 ntBASIC13.99□□□□□ -0.17
LHX2P50458 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 C1QBPP1-201ENST00000400117 770 ntBASIC13.99□□□□□ -0.17
LHX2P50458 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.99□□□□□ -0.17
LHX2P50458 SOCS2P1-201ENST00000417727 557 ntBASIC13.99□□□□□ -0.17
LHX2P50458 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.99□□□□□ -0.17
LHX2P50458 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 U91328.1-201ENST00000437528 223 ntBASIC13.99□□□□□ -0.17
LHX2P50458 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.99□□□□□ -0.17
LHX2P50458 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.99□□□□□ -0.17
LHX2P50458 ENPP7P5-201ENST00000541031 1031 ntBASIC13.99□□□□□ -0.17
LHX2P50458 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.99□□□□□ -0.17
LHX2P50458 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LHX2P50458 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.99□□□□□ -0.17
LHX2P50458 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.99□□□□□ -0.17
LHX2P50458 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.99□□□□□ -0.17
LHX2P50458 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 PRAL-201ENST00000624952 3286 ntBASIC13.99□□□□□ -0.17
LHX2P50458 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LHX2P50458 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LHX2P50458 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.99□□□□□ -0.17
LHX2P50458 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
LHX2P50458 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LHX2P50458 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX2P50458 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.98□□□□□ -0.17
LHX2P50458 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 CICP13-201ENST00000422015 2789 ntBASIC13.98□□□□□ -0.17
LHX2P50458 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.98□□□□□ -0.17
LHX2P50458 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
LHX2P50458 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.98□□□□□ -0.17
LHX2P50458 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.98□□□□□ -0.17
LHX2P50458 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LHX2P50458 AC010319.3-201ENST00000597028 470 ntBASIC13.98□□□□□ -0.17
LHX2P50458 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LHX2P50458 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
LHX2P50458 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LHX2P50458 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms