Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDC34P49427 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CDC34P49427 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
CDC34P49427 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDC34P49427 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CDC34P49427 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.52□□□□□ -0.41
CDC34P49427 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDC34P49427 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDC34P49427 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.52□□□□□ -0.41
CDC34P49427 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.51□□□□□ -0.41
CDC34P49427 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.51□□□□□ -0.41
CDC34P49427 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.51□□□□□ -0.41
CDC34P49427 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CDC34P49427 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.51□□□□□ -0.41
CDC34P49427 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CDC34P49427 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.51□□□□□ -0.41
CDC34P49427 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.51□□□□□ -0.41
CDC34P49427 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.51□□□□□ -0.41
CDC34P49427 RBM17P3-201ENST00000417687 1192 ntBASIC12.51□□□□□ -0.41
CDC34P49427 AC132008.2-207ENST00000454517 770 ntBASIC12.51□□□□□ -0.41
CDC34P49427 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 AP002469.2-201ENST00000531724 424 ntBASIC12.51□□□□□ -0.41
CDC34P49427 AL031055.1-201ENST00000606362 631 ntBASIC12.51□□□□□ -0.41
CDC34P49427 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.51□□□□□ -0.41
CDC34P49427 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.51□□□□□ -0.41
CDC34P49427 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.51□□□□□ -0.41
CDC34P49427 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.51□□□□□ -0.41
CDC34P49427 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.51□□□□□ -0.41
CDC34P49427 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CDC34P49427 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.51□□□□□ -0.41
CDC34P49427 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDC34P49427 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CDC34P49427 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.5□□□□□ -0.41
CDC34P49427 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.5□□□□□ -0.41
CDC34P49427 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.5□□□□□ -0.41
CDC34P49427 RNU1-129P-201ENST00000384064 167 ntBASIC12.5□□□□□ -0.41
CDC34P49427 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.5□□□□□ -0.41
CDC34P49427 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.5□□□□□ -0.41
CDC34P49427 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.5□□□□□ -0.41
CDC34P49427 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.5□□□□□ -0.41
CDC34P49427 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.5□□□□□ -0.41
CDC34P49427 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.5□□□□□ -0.41
CDC34P49427 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.5□□□□□ -0.41
CDC34P49427 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 U1.21-201ENST00000580816 167 ntBASIC12.5□□□□□ -0.41
CDC34P49427 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.5□□□□□ -0.41
CDC34P49427 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.5□□□□□ -0.41
CDC34P49427 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.5□□□□□ -0.41
CDC34P49427 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 AC006504.4-201ENST00000592118 1568 ntBASIC12.5□□□□□ -0.41
CDC34P49427 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms