Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL15A1P39059 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 AC004898.1-201ENST00000451057 766 ntBASIC19.7■□□□□ 0.74
COL15A1P39059 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.7■□□□□ 0.74
COL15A1P39059 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.7■□□□□ 0.74
COL15A1P39059 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.7■□□□□ 0.74
COL15A1P39059 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.7■□□□□ 0.74
COL15A1P39059 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.7■□□□□ 0.74
COL15A1P39059 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL15A1P39059 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.7■□□□□ 0.74
COL15A1P39059 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
COL15A1P39059 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL15A1P39059 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL15A1P39059 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.7■□□□□ 0.74
COL15A1P39059 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL15A1P39059 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.7■□□□□ 0.74
COL15A1P39059 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 KLF2P2-201ENST00000416807 1039 ntBASIC19.7■□□□□ 0.74
COL15A1P39059 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.7■□□□□ 0.74
COL15A1P39059 SCARNA20.5-201ENST00000516991 142 ntBASIC19.7■□□□□ 0.74
COL15A1P39059 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.7■□□□□ 0.74
COL15A1P39059 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.7■□□□□ 0.74
COL15A1P39059 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
COL15A1P39059 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL15A1P39059 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COL15A1P39059 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
COL15A1P39059 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL15A1P39059 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL15A1P39059 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.69■□□□□ 0.74
COL15A1P39059 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL15A1P39059 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COL15A1P39059 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL15A1P39059 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.69■□□□□ 0.74
COL15A1P39059 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL15A1P39059 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COL15A1P39059 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL15A1P39059 AC026691.1-201ENST00000602502 2017 ntBASIC19.69■□□□□ 0.74
COL15A1P39059 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.69■□□□□ 0.74
COL15A1P39059 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL15A1P39059 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COL15A1P39059 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL15A1P39059 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
COL15A1P39059 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL15A1P39059 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
COL15A1P39059 CD8B2-202ENST00000417670 633 ntBASIC19.69■□□□□ 0.74
COL15A1P39059 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.69■□□□□ 0.74
COL15A1P39059 CNN2P10-201ENST00000443067 918 ntBASIC19.69■□□□□ 0.74
COL15A1P39059 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.69■□□□□ 0.74
COL15A1P39059 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.69■□□□□ 0.74
COL15A1P39059 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.69■□□□□ 0.74
COL15A1P39059 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.69■□□□□ 0.74
COL15A1P39059 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.69■□□□□ 0.74
COL15A1P39059 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL15A1P39059 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.69■□□□□ 0.74
COL15A1P39059 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL15A1P39059 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL15A1P39059 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL15A1P39059 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL15A1P39059 TNRC18P3-201ENST00000441896 2691 ntBASIC19.69■□□□□ 0.74
COL15A1P39059 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 AC018735.1-201ENST00000437208 1502 ntBASIC19.68■□□□□ 0.74
COL15A1P39059 AC015818.8-201ENST00000587907 1519 ntBASIC19.68■□□□□ 0.74
COL15A1P39059 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.68■□□□□ 0.74
COL15A1P39059 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
COL15A1P39059 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.68■□□□□ 0.74
COL15A1P39059 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.68■□□□□ 0.74
COL15A1P39059 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
COL15A1P39059 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 AC092506.1-202ENST00000401022 528 ntBASIC19.68■□□□□ 0.74
COL15A1P39059 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms