Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SNCAP37840 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.05□□□□□ -0.32
SNCAP37840 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNCAP37840 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.05□□□□□ -0.32
SNCAP37840 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.05□□□□□ -0.32
SNCAP37840 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.04□□□□□ -0.32
SNCAP37840 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.04□□□□□ -0.32
SNCAP37840 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.04□□□□□ -0.32
SNCAP37840 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.04□□□□□ -0.32
SNCAP37840 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SNCAP37840 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.04□□□□□ -0.32
SNCAP37840 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.04□□□□□ -0.32
SNCAP37840 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.04□□□□□ -0.32
SNCAP37840 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SNCAP37840 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.04□□□□□ -0.32
SNCAP37840 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
SNCAP37840 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.04□□□□□ -0.32
SNCAP37840 PMS2P4-201ENST00000412466 1052 ntBASIC13.04□□□□□ -0.32
SNCAP37840 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
SNCAP37840 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.04□□□□□ -0.32
SNCAP37840 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.04□□□□□ -0.32
SNCAP37840 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.04□□□□□ -0.32
SNCAP37840 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.04□□□□□ -0.32
SNCAP37840 CLEC4GP1-201ENST00000596555 870 ntBASIC13.04□□□□□ -0.32
SNCAP37840 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SNCAP37840 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.04□□□□□ -0.32
SNCAP37840 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
SNCAP37840 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.04□□□□□ -0.32
SNCAP37840 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNCAP37840 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SNCAP37840 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.04□□□□□ -0.32
SNCAP37840 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SNCAP37840 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.03□□□□□ -0.32
SNCAP37840 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 ST20-AS1-201ENST00000560255 4223 ntBASIC13.03□□□□□ -0.32
SNCAP37840 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.03□□□□□ -0.32
SNCAP37840 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.03□□□□□ -0.32
SNCAP37840 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 FAM185BP-201ENST00000443595 716 ntBASIC13.03□□□□□ -0.32
SNCAP37840 FAM197Y8-203ENST00000450145 560 ntBASIC13.03□□□□□ -0.32
SNCAP37840 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.03□□□□□ -0.32
SNCAP37840 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.03□□□□□ -0.32
SNCAP37840 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.03□□□□□ -0.32
SNCAP37840 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.03□□□□□ -0.32
SNCAP37840 AC004790.2-201ENST00000623588 572 ntBASIC13.03□□□□□ -0.32
SNCAP37840 AL645728.2-201ENST00000641974 660 ntBASIC13.03□□□□□ -0.32
SNCAP37840 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.03□□□□□ -0.32
SNCAP37840 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.03□□□□□ -0.32
SNCAP37840 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms