Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.65■□□□□ 0.26
PCK1P35558 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.65■□□□□ 0.26
PCK1P35558 AC007967.4-201ENST00000614700 386 ntBASIC16.65■□□□□ 0.26
PCK1P35558 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCK1P35558 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCK1P35558 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCK1P35558 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCK1P35558 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCK1P35558 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCK1P35558 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCK1P35558 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCK1P35558 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.65■□□□□ 0.26
PCK1P35558 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.65■□□□□ 0.26
PCK1P35558 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.65■□□□□ 0.26
PCK1P35558 AP003680.1-201ENST00000598970 3660 ntBASIC16.65■□□□□ 0.26
PCK1P35558 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.65■□□□□ 0.26
PCK1P35558 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCK1P35558 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCK1P35558 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.65■□□□□ 0.26
PCK1P35558 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
PCK1P35558 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.65■□□□□ 0.26
PCK1P35558 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.65■□□□□ 0.26
PCK1P35558 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCK1P35558 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCK1P35558 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCK1P35558 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCK1P35558 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCK1P35558 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCK1P35558 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCK1P35558 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCK1P35558 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.64■□□□□ 0.25
PCK1P35558 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCK1P35558 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.64■□□□□ 0.25
PCK1P35558 SPDYE17-201ENST00000412399 783 ntBASIC16.64■□□□□ 0.25
PCK1P35558 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PCK1P35558 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.64■□□□□ 0.25
PCK1P35558 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.64■□□□□ 0.25
PCK1P35558 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCK1P35558 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
PCK1P35558 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCK1P35558 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
PCK1P35558 AP001059.3-201ENST00000619053 235 ntBASIC16.64■□□□□ 0.25
PCK1P35558 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCK1P35558 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.64■□□□□ 0.25
PCK1P35558 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCK1P35558 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.64■□□□□ 0.25
PCK1P35558 CICP13-201ENST00000422015 2789 ntBASIC16.64■□□□□ 0.25
PCK1P35558 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PCK1P35558 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.64■□□□□ 0.25
PCK1P35558 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.64■□□□□ 0.25
PCK1P35558 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCK1P35558 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.63■□□□□ 0.25
PCK1P35558 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.63■□□□□ 0.25
PCK1P35558 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.63■□□□□ 0.25
PCK1P35558 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCK1P35558 CNN2P11-201ENST00000429351 262 ntBASIC16.63■□□□□ 0.25
PCK1P35558 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.63■□□□□ 0.25
PCK1P35558 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.63■□□□□ 0.25
PCK1P35558 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 AL512356.2-201ENST00000546955 174 ntBASIC16.63■□□□□ 0.25
PCK1P35558 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCK1P35558 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.63■□□□□ 0.25
PCK1P35558 AC134684.3-201ENST00000641758 218 ntBASIC16.63■□□□□ 0.25
PCK1P35558 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.63■□□□□ 0.25
PCK1P35558 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCK1P35558 AL035456.1-201ENST00000456064 1369 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms