Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.98□□□□□ -0.01
RORAP35398 AL450472.2-201ENST00000603663 1156 ntBASIC14.98□□□□□ -0.01
RORAP35398 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.98□□□□□ -0.01
RORAP35398 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.98□□□□□ -0.01
RORAP35398 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.98□□□□□ -0.01
RORAP35398 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.98□□□□□ -0.01
RORAP35398 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RORAP35398 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.97□□□□□ -0.01
RORAP35398 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.97□□□□□ -0.01
RORAP35398 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.97□□□□□ -0.01
RORAP35398 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RORAP35398 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 TOMM22P5-201ENST00000416399 439 ntBASIC14.97□□□□□ -0.01
RORAP35398 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.97□□□□□ -0.01
RORAP35398 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.97□□□□□ -0.01
RORAP35398 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 GPR53P-205ENST00000457298 1084 ntBASIC14.97□□□□□ -0.01
RORAP35398 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.97□□□□□ -0.01
RORAP35398 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.97□□□□□ -0.01
RORAP35398 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.97□□□□□ -0.01
RORAP35398 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 AC036164.1-201ENST00000570544 333 ntBASIC14.97□□□□□ -0.01
RORAP35398 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RORAP35398 AL162274.1-201ENST00000617191 1098 ntBASIC14.97□□□□□ -0.01
RORAP35398 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RORAP35398 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.97□□□□□ -0.01
RORAP35398 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.97□□□□□ -0.01
RORAP35398 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RORAP35398 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RORAP35398 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RORAP35398 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.96□□□□□ -0.01
RORAP35398 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.96□□□□□ -0.01
RORAP35398 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RORAP35398 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.96□□□□□ -0.01
RORAP35398 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RORAP35398 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.96□□□□□ -0.01
RORAP35398 KRT18P64-201ENST00000434946 1219 ntBASIC14.96□□□□□ -0.01
RORAP35398 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.96□□□□□ -0.01
RORAP35398 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.96□□□□□ -0.01
RORAP35398 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RORAP35398 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.96□□□□□ -0.01
RORAP35398 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.96□□□□□ -0.01
RORAP35398 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.96□□□□□ -0.01
RORAP35398 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms