Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.55□□□□□ -0.24
CD40P25942 AL049840.4-201ENST00000602422 811 ntBASIC13.55□□□□□ -0.24
CD40P25942 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.55□□□□□ -0.24
CD40P25942 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CD40P25942 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 AC024909.3-201ENST00000611513 2257 ntBASIC13.55□□□□□ -0.24
CD40P25942 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CD40P25942 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CD40P25942 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CD40P25942 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CD40P25942 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD40P25942 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40P25942 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.54□□□□□ -0.24
CD40P25942 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 INTS4P2-202ENST00000614726 2019 ntBASIC13.54□□□□□ -0.24
CD40P25942 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD40P25942 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD40P25942 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CD40P25942 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CD40P25942 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.54□□□□□ -0.24
CD40P25942 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CD40P25942 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40P25942 AL359711.2-201ENST00000563105 872 ntBASIC13.54□□□□□ -0.24
CD40P25942 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CD40P25942 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
CD40P25942 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.54□□□□□ -0.24
CD40P25942 CU634019.7-201ENST00000624153 1185 ntBASIC13.54□□□□□ -0.24
CD40P25942 FP236241.2-201ENST00000624906 1185 ntBASIC13.54□□□□□ -0.24
CD40P25942 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.54□□□□□ -0.24
CD40P25942 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40P25942 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
CD40P25942 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40P25942 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40P25942 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CD40P25942 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD40P25942 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40P25942 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40P25942 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CD40P25942 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD40P25942 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CD40P25942 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40P25942 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CD40P25942 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CD40P25942 SOCS2P1-201ENST00000417727 557 ntBASIC13.53□□□□□ -0.24
CD40P25942 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40P25942 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
CD40P25942 VDAC1P7-201ENST00000462417 847 ntBASIC13.53□□□□□ -0.24
CD40P25942 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.53□□□□□ -0.24
CD40P25942 AC015936.2-201ENST00000593177 259 ntBASIC13.53□□□□□ -0.24
CD40P25942 AC010319.3-201ENST00000597028 470 ntBASIC13.53□□□□□ -0.24
CD40P25942 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.53□□□□□ -0.24
CD40P25942 AL162274.1-201ENST00000617191 1098 ntBASIC13.53□□□□□ -0.24
CD40P25942 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40P25942 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms