Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
COL8A2P25067 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 AC136604.1-201ENST00000418535 575 ntBASIC13.31□□□□□ -0.28
COL8A2P25067 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.31□□□□□ -0.28
COL8A2P25067 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.31□□□□□ -0.28
COL8A2P25067 AC011495.1-201ENST00000498085 584 ntBASIC13.31□□□□□ -0.28
COL8A2P25067 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.31□□□□□ -0.28
COL8A2P25067 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.31□□□□□ -0.28
COL8A2P25067 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.31□□□□□ -0.28
COL8A2P25067 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.31□□□□□ -0.28
COL8A2P25067 IGHV3-72-202ENST00000621503 303 ntBASIC13.31□□□□□ -0.28
COL8A2P25067 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
COL8A2P25067 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.31□□□□□ -0.28
COL8A2P25067 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
COL8A2P25067 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.31□□□□□ -0.28
COL8A2P25067 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
COL8A2P25067 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
COL8A2P25067 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
COL8A2P25067 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
COL8A2P25067 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.3□□□□□ -0.28
COL8A2P25067 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 MTHFR-217ENST00000641820 1569 ntBASIC13.3□□□□□ -0.28
COL8A2P25067 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
COL8A2P25067 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 TOMM22P5-201ENST00000416399 439 ntBASIC13.3□□□□□ -0.28
COL8A2P25067 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.3□□□□□ -0.28
COL8A2P25067 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.3□□□□□ -0.28
COL8A2P25067 AC244107.1-201ENST00000442033 332 ntBASIC13.3□□□□□ -0.28
COL8A2P25067 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.3□□□□□ -0.28
COL8A2P25067 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.3□□□□□ -0.28
COL8A2P25067 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
COL8A2P25067 WFDC1-204ENST00000613603 549 ntBASIC13.3□□□□□ -0.28
COL8A2P25067 AL158212.4-201ENST00000624062 1286 ntBASIC13.3□□□□□ -0.28
COL8A2P25067 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.3□□□□□ -0.28
COL8A2P25067 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
COL8A2P25067 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
COL8A2P25067 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
COL8A2P25067 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
COL8A2P25067 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
COL8A2P25067 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
COL8A2P25067 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.29□□□□□ -0.28
COL8A2P25067 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
COL8A2P25067 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
COL8A2P25067 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 AC010491.1-201ENST00000563101 2797 ntBASIC13.29□□□□□ -0.28
COL8A2P25067 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
COL8A2P25067 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.29□□□□□ -0.28
COL8A2P25067 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms