Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP24386 RARRES2P9-201ENST00000565168 469 ntBASIC14.79□□□□□ -0.04
CHMP24386 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.79□□□□□ -0.04
CHMP24386 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 AP3S2-216ENST00000617003 1561 ntBASIC14.79□□□□□ -0.04
CHMP24386 Z92544.3-201ENST00000624747 417 ntBASIC14.79□□□□□ -0.04
CHMP24386 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP24386 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP24386 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP24386 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CHMP24386 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CHMP24386 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHMP24386 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP24386 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 AC011477.6-201ENST00000604980 1927 ntBASIC14.78□□□□□ -0.04
CHMP24386 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHMP24386 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP24386 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHMP24386 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.78□□□□□ -0.04
CHMP24386 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.78□□□□□ -0.04
CHMP24386 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP24386 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.78□□□□□ -0.04
CHMP24386 AC024267.1-201ENST00000582320 895 ntBASIC14.78□□□□□ -0.04
CHMP24386 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 AC106028.4-201ENST00000614509 607 ntBASIC14.78□□□□□ -0.04
CHMP24386 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHMP24386 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
CHMP24386 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP24386 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
CHMP24386 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP24386 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CHMP24386 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP24386 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.77□□□□□ -0.04
CHMP24386 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP24386 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CHMP24386 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.77□□□□□ -0.04
CHMP24386 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CHMP24386 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP24386 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP24386 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP24386 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP24386 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP24386 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP24386 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP24386 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP24386 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.77□□□□□ -0.04
CHMP24386 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP24386 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CHMP24386 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CHMP24386 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.77□□□□□ -0.05
CHMP24386 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.77□□□□□ -0.05
CHMP24386 HMGN1P19-201ENST00000436976 333 ntBASIC14.77□□□□□ -0.05
CHMP24386 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms