Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 CYMP-203ENST00000474680 1263 ntBASIC15.9■□□□□ 0.14
HLA-DPA1P20036 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 IGHV3-42-201ENST00000520410 361 ntBASIC15.9■□□□□ 0.14
HLA-DPA1P20036 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 AC074044.1-201ENST00000609673 707 ntBASIC15.9■□□□□ 0.14
HLA-DPA1P20036 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 SSR4P1-203ENST00000599569 2260 ntBASIC15.9■□□□□ 0.14
HLA-DPA1P20036 AC100757.3-201ENST00000622361 1406 ntBASIC15.9■□□□□ 0.14
HLA-DPA1P20036 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 AC022532.1-201ENST00000624563 1728 ntBASIC15.9■□□□□ 0.14
HLA-DPA1P20036 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPA1P20036 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.89■□□□□ 0.13
HLA-DPA1P20036 AC074338.1-201ENST00000416825 156 ntBASIC15.89■□□□□ 0.13
HLA-DPA1P20036 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 AC241585.1-201ENST00000433527 519 ntBASIC15.89■□□□□ 0.13
HLA-DPA1P20036 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.89■□□□□ 0.13
HLA-DPA1P20036 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 SLED1-202ENST00000512051 380 ntBASIC15.89■□□□□ 0.13
HLA-DPA1P20036 SDHAP3-202ENST00000515467 728 ntBASIC15.89■□□□□ 0.13
HLA-DPA1P20036 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 DUX4L27-201ENST00000554796 1261 ntBASIC15.89■□□□□ 0.13
HLA-DPA1P20036 AL590560.3-201ENST00000623350 461 ntBASIC15.89■□□□□ 0.13
HLA-DPA1P20036 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPA1P20036 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms