Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 AC092919.2-201ENST00000623631 1645 ntBASIC12.89□□□□□ -0.35
DEFA4P12838 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.89□□□□□ -0.35
DEFA4P12838 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 KRT18P3-201ENST00000451602 1288 ntBASIC12.89□□□□□ -0.35
DEFA4P12838 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.89□□□□□ -0.35
DEFA4P12838 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
DEFA4P12838 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 AC091951.1-201ENST00000512854 2465 ntBASIC12.89□□□□□ -0.35
DEFA4P12838 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.89□□□□□ -0.35
DEFA4P12838 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 AL109954.1-202ENST00000564051 2148 ntBASIC12.89□□□□□ -0.35
DEFA4P12838 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
DEFA4P12838 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.89□□□□□ -0.35
DEFA4P12838 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
DEFA4P12838 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
DEFA4P12838 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.88□□□□□ -0.35
DEFA4P12838 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
DEFA4P12838 PMS2P7-201ENST00000506558 1336 ntBASIC12.88□□□□□ -0.35
DEFA4P12838 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 WASH6P-202ENST00000359512 1437 ntBASIC12.88□□□□□ -0.35
DEFA4P12838 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
DEFA4P12838 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.88□□□□□ -0.35
DEFA4P12838 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 AC026396.1-201ENST00000419388 421 ntBASIC12.88□□□□□ -0.35
DEFA4P12838 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.88□□□□□ -0.35
DEFA4P12838 AC093724.1-201ENST00000448659 1027 ntBASIC12.88□□□□□ -0.35
DEFA4P12838 FDX1P1-201ENST00000449115 551 ntBASIC12.88□□□□□ -0.35
DEFA4P12838 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
DEFA4P12838 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.88□□□□□ -0.35
DEFA4P12838 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.88□□□□□ -0.35
DEFA4P12838 PDPK2P-202ENST00000562415 1191 ntBASIC12.88□□□□□ -0.35
DEFA4P12838 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.88□□□□□ -0.35
DEFA4P12838 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.88□□□□□ -0.35
DEFA4P12838 AL365330.1-201ENST00000607459 531 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms