Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CD28P10747 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
CD28P10747 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 AL139384.1-201ENST00000612143 3047 ntBASIC12.33□□□□□ -0.44
CD28P10747 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.33□□□□□ -0.44
CD28P10747 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CD28P10747 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CD28P10747 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.33□□□□□ -0.44
CD28P10747 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CD28P10747 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CD28P10747 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.33□□□□□ -0.44
CD28P10747 KRT18P64-201ENST00000434946 1219 ntBASIC12.33□□□□□ -0.44
CD28P10747 RPS2P32-201ENST00000439199 892 ntBASIC12.33□□□□□ -0.44
CD28P10747 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CD28P10747 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.33□□□□□ -0.44
CD28P10747 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.33□□□□□ -0.44
CD28P10747 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CD28P10747 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.33□□□□□ -0.44
CD28P10747 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
CD28P10747 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.33□□□□□ -0.44
CD28P10747 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.33□□□□□ -0.44
CD28P10747 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD28P10747 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CD28P10747 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CD28P10747 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.32□□□□□ -0.44
CD28P10747 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.32□□□□□ -0.44
CD28P10747 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.32□□□□□ -0.44
CD28P10747 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.32□□□□□ -0.44
CD28P10747 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.32□□□□□ -0.44
CD28P10747 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 CROCCP4-201ENST00000457096 498 ntBASIC12.32□□□□□ -0.44
CD28P10747 PHKG1P2-201ENST00000457537 863 ntBASIC12.32□□□□□ -0.44
CD28P10747 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 FAM86LP-201ENST00000478302 853 ntBASIC12.32□□□□□ -0.44
CD28P10747 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.32□□□□□ -0.44
CD28P10747 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.32□□□□□ -0.44
CD28P10747 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.32□□□□□ -0.44
CD28P10747 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms