Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
DHFRP00374 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DHFRP00374 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DHFRP00374 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DHFRP00374 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DHFRP00374 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
DHFRP00374 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DHFRP00374 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 AC011477.6-201ENST00000604980 1927 ntBASIC13.72□□□□□ -0.21
DHFRP00374 AC136759.1-202ENST00000530858 2194 ntBASIC13.72□□□□□ -0.21
DHFRP00374 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DHFRP00374 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 U82695.1-201ENST00000635752 1889 ntBASIC13.72□□□□□ -0.21
DHFRP00374 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.72□□□□□ -0.21
DHFRP00374 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.72□□□□□ -0.21
DHFRP00374 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DHFRP00374 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.72□□□□□ -0.21
DHFRP00374 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
DHFRP00374 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.72□□□□□ -0.21
DHFRP00374 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.72□□□□□ -0.21
DHFRP00374 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.72□□□□□ -0.21
DHFRP00374 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DHFRP00374 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.72□□□□□ -0.21
DHFRP00374 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.72□□□□□ -0.21
DHFRP00374 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.72□□□□□ -0.21
DHFRP00374 AC074051.2-201ENST00000565115 352 ntBASIC13.72□□□□□ -0.21
DHFRP00374 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.72□□□□□ -0.21
DHFRP00374 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DHFRP00374 AL358472.4-201ENST00000633140 710 ntBASIC13.72□□□□□ -0.21
DHFRP00374 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 NSUN5P1-202ENST00000421140 1535 ntBASIC13.72□□□□□ -0.21
DHFRP00374 NSUN5P2-203ENST00000457352 1529 ntBASIC13.72□□□□□ -0.21
DHFRP00374 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.72□□□□□ -0.21
DHFRP00374 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.72□□□□□ -0.21
DHFRP00374 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.72□□□□□ -0.21
DHFRP00374 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 INTS4P1-203ENST00000641008 3683 ntBASIC13.72□□□□□ -0.21
DHFRP00374 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.72□□□□□ -0.21
DHFRP00374 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.72□□□□□ -0.21
DHFRP00374 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DHFRP00374 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
DHFRP00374 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DHFRP00374 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
DHFRP00374 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.71□□□□□ -0.21
DHFRP00374 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.71□□□□□ -0.21
DHFRP00374 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.71□□□□□ -0.21
DHFRP00374 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.71□□□□□ -0.21
DHFRP00374 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.71□□□□□ -0.21
DHFRP00374 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
DHFRP00374 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.71□□□□□ -0.21
DHFRP00374 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.71□□□□□ -0.21
DHFRP00374 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.71□□□□□ -0.21
DHFRP00374 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
DHFRP00374 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.71□□□□□ -0.21
DHFRP00374 KRT18P35-201ENST00000510488 1269 ntBASIC13.71□□□□□ -0.21
DHFRP00374 AP000867.3-201ENST00000524675 377 ntBASIC13.71□□□□□ -0.21
DHFRP00374 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.71□□□□□ -0.21
DHFRP00374 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.71□□□□□ -0.21
DHFRP00374 AC092329.2-201ENST00000598402 547 ntBASIC13.71□□□□□ -0.21
DHFRP00374 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.71□□□□□ -0.21
DHFRP00374 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DHFRP00374 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms