Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.03■□□□□ 0.32
EXTL3O43909 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.03■□□□□ 0.32
EXTL3O43909 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.03■□□□□ 0.32
EXTL3O43909 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
EXTL3O43909 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.03■□□□□ 0.32
EXTL3O43909 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.03■□□□□ 0.32
EXTL3O43909 DFFBP1-201ENST00000433250 979 ntBASIC17.03■□□□□ 0.32
EXTL3O43909 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
EXTL3O43909 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.03■□□□□ 0.32
EXTL3O43909 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.03■□□□□ 0.32
EXTL3O43909 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.03■□□□□ 0.32
EXTL3O43909 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.03■□□□□ 0.32
EXTL3O43909 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.03■□□□□ 0.32
EXTL3O43909 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.03■□□□□ 0.32
EXTL3O43909 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
EXTL3O43909 AC000095.1-201ENST00000603208 874 ntBASIC17.03■□□□□ 0.32
EXTL3O43909 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.03■□□□□ 0.32
EXTL3O43909 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
EXTL3O43909 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
EXTL3O43909 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.03■□□□□ 0.32
EXTL3O43909 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.03■□□□□ 0.32
EXTL3O43909 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.03■□□□□ 0.32
EXTL3O43909 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
EXTL3O43909 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EXTL3O43909 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
EXTL3O43909 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.03■□□□□ 0.32
EXTL3O43909 SLC7A15P-201ENST00000424028 1363 ntBASIC17.02■□□□□ 0.32
EXTL3O43909 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.02■□□□□ 0.32
EXTL3O43909 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.02■□□□□ 0.32
EXTL3O43909 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.02■□□□□ 0.32
EXTL3O43909 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
EXTL3O43909 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.02■□□□□ 0.32
EXTL3O43909 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 AC087481.3-201ENST00000602886 1894 ntBASIC17.02■□□□□ 0.32
EXTL3O43909 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.02■□□□□ 0.32
EXTL3O43909 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.02■□□□□ 0.32
EXTL3O43909 AC055876.2-201ENST00000531834 546 ntBASIC17.02■□□□□ 0.32
EXTL3O43909 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.02■□□□□ 0.32
EXTL3O43909 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.02■□□□□ 0.32
EXTL3O43909 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.02■□□□□ 0.32
EXTL3O43909 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
EXTL3O43909 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
EXTL3O43909 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
EXTL3O43909 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
EXTL3O43909 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.02■□□□□ 0.31
EXTL3O43909 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
EXTL3O43909 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
EXTL3O43909 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
EXTL3O43909 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.02■□□□□ 0.31
EXTL3O43909 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.02■□□□□ 0.31
EXTL3O43909 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
EXTL3O43909 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EXTL3O43909 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EXTL3O43909 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
EXTL3O43909 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EXTL3O43909 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.01■□□□□ 0.31
EXTL3O43909 CLK3P2-201ENST00000427566 1453 ntBASIC17.01■□□□□ 0.31
EXTL3O43909 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
EXTL3O43909 AC007541.1-201ENST00000570282 1469 ntBASIC17.01■□□□□ 0.31
EXTL3O43909 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.01■□□□□ 0.31
EXTL3O43909 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EXTL3O43909 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.01■□□□□ 0.31
EXTL3O43909 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
EXTL3O43909 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.01■□□□□ 0.31
EXTL3O43909 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.01■□□□□ 0.31
EXTL3O43909 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.01■□□□□ 0.31
EXTL3O43909 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.01■□□□□ 0.31
EXTL3O43909 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
EXTL3O43909 CRB3P1-201ENST00000449338 276 ntBASIC17.01■□□□□ 0.31
EXTL3O43909 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.01■□□□□ 0.31
EXTL3O43909 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms