Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TRIM38O00635 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM38O00635 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 SPDYE19P-201ENST00000338590 713 ntBASIC15.9■□□□□ 0.14
TRIM38O00635 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM38O00635 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRIM38O00635 DFFBP1-201ENST00000433250 979 ntBASIC15.9■□□□□ 0.14
TRIM38O00635 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM38O00635 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM38O00635 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM38O00635 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM38O00635 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.9■□□□□ 0.14
TRIM38O00635 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM38O00635 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM38O00635 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRIM38O00635 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM38O00635 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM38O00635 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM38O00635 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM38O00635 PPT1-215ENST00000641471 2368 ntBASIC15.89■□□□□ 0.13
TRIM38O00635 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRIM38O00635 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM38O00635 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 AC098614.1-201ENST00000368528 745 ntBASIC15.89■□□□□ 0.13
TRIM38O00635 ARSEP1-201ENST00000420443 635 ntBASIC15.89■□□□□ 0.13
TRIM38O00635 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM38O00635 SPDYE18-201ENST00000510091 1050 ntBASIC15.89■□□□□ 0.13
TRIM38O00635 DOC2GP-202ENST00000514950 1163 ntBASIC15.89■□□□□ 0.13
TRIM38O00635 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM38O00635 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM38O00635 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM38O00635 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.89■□□□□ 0.13
TRIM38O00635 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.89■□□□□ 0.13
TRIM38O00635 CHCHD2P3-201ENST00000603038 451 ntBASIC15.89■□□□□ 0.13
TRIM38O00635 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM38O00635 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM38O00635 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM38O00635 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM38O00635 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM38O00635 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRIM38O00635 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 AL589702.1-201ENST00000641229 1509 ntBASIC15.89■□□□□ 0.13
TRIM38O00635 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM38O00635 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM38O00635 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM38O00635 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM38O00635 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM38O00635 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM38O00635 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
TRIM38O00635 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM38O00635 ATP5G2P4-201ENST00000442175 420 ntBASIC15.88■□□□□ 0.13
TRIM38O00635 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM38O00635 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRIM38O00635 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM38O00635 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM38O00635 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms