Protein–RNA interactions for Protein: A8MYP8

ODF3B, Outer dense fiber protein 3B, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3BA8MYP8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 AC134915.1-201ENST00000426461 574 ntBASIC12.6□□□□□ -0.39
ODF3BA8MYP8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 AL596325.1-201ENST00000563991 1082 ntBASIC12.6□□□□□ -0.39
ODF3BA8MYP8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ODF3BA8MYP8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.59□□□□□ -0.39
ODF3BA8MYP8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 AC107373.2-201ENST00000607735 490 ntBASIC12.59□□□□□ -0.39
ODF3BA8MYP8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 AC105917.1-201ENST00000506637 2539 ntBASIC12.59□□□□□ -0.39
ODF3BA8MYP8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ODF3BA8MYP8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.39
ODF3BA8MYP8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
ODF3BA8MYP8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
ODF3BA8MYP8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ODF3BA8MYP8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.58□□□□□ -0.4
ODF3BA8MYP8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms