Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 IL9RP2-201ENST00000423948 1312 ntBASIC16.75■□□□□ 0.27
RCCD1A6NED2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 SLC25A1P1-201ENST00000528351 927 ntBASIC16.75■□□□□ 0.27
RCCD1A6NED2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 AC117489.1-201ENST00000625169 3217 ntBASIC16.75■□□□□ 0.27
RCCD1A6NED2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 HLA-H-201ENST00000383620 1096 ntBASIC16.74■□□□□ 0.27
RCCD1A6NED2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.74■□□□□ 0.27
RCCD1A6NED2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCCD1A6NED2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RCCD1A6NED2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 AP3S2-216ENST00000617003 1561 ntBASIC16.73■□□□□ 0.27
RCCD1A6NED2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms