Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 AC006538.3-201ENST00000612495 578 ntBASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 TEX28P1-201ENST00000613479 1221 ntBASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 TEX28P2-201ENST00000617764 1221 ntBASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 AL033527.5-202ENST00000641632 1098 ntBASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC162PA2VCL2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC144831.1-201ENST00000573312 2656 ntBASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC107890.1-201ENST00000422478 521 ntBASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC069120.2-201ENST00000524091 540 ntBASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC140878.1-201ENST00000565277 250 ntBASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 MIR6069-201ENST00000620069 79 ntBASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC073592.8-201ENST00000624126 511 ntBASIC15.77■□□□□ 0.12
CCDC162PA2VCL2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms