Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 RPS8P6-201ENST00000426177 609 ntBASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 PRSS29P-201ENST00000440800 595 ntBASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 PHKG1P2-201ENST00000457537 863 ntBASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 AC097359.3-201ENST00000603982 1210 ntBASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 INTS4P1-203ENST00000641008 3683 ntBASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 MBLAC2-202ENST00000514906 1936 ntBASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 AP001267.2-201ENST00000532619 2086 ntBASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 CICP11-201ENST00000434745 2827 ntBASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 AKR1C7P-201ENST00000305623 895 ntBASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 AC105339.3-201ENST00000560043 636 ntBASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 AC005593.1-201ENST00000624894 515 ntBASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV3S1A0A5B6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 EEF1DP4-201ENST00000446006 880 ntBASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms