Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 CROCCP1-201ENST00000426910 5675 ntBASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC104457.1-201ENST00000401024 814 ntBASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC002472.2-201ENST00000442739 958 ntBASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 RN7SL399P-201ENST00000471648 279 ntBASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC055876.2-201ENST00000531834 546 ntBASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC036164.1-201ENST00000570544 333 ntBASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 LINC02560-201ENST00000596379 459 ntBASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC008761.3-201ENST00000624803 892 ntBASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-4A0A0C4DH59 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 GHSR-202ENST00000427970 912 ntBASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 DFFBP1-201ENST00000433250 979 ntBASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms