Protein–RNA interactions for Protein: S4R325

URGCP-MRPS24, URGCP-MRPS24 readthrough, humanhuman

Predictions only

Length 110 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URGCP-MRPS24S4R325 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
URGCP-MRPS24S4R325 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
URGCP-MRPS24S4R325 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
URGCP-MRPS24S4R325 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
URGCP-MRPS24S4R325 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
URGCP-MRPS24S4R325 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.21■□□□□ 0.51
URGCP-MRPS24S4R325 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
URGCP-MRPS24S4R325 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
URGCP-MRPS24S4R325 AL391121.1-201ENST00000607967 1349 ntBASIC18.21■□□□□ 0.51
URGCP-MRPS24S4R325 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
URGCP-MRPS24S4R325 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 AC141586.4-201ENST00000624558 1573 ntBASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.2■□□□□ 0.5
URGCP-MRPS24S4R325 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 AC004812.2-201ENST00000611079 2094 ntBASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 AC136428.2-201ENST00000563187 214 ntBASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URGCP-MRPS24S4R325 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URGCP-MRPS24S4R325 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.18■□□□□ 0.5
URGCP-MRPS24S4R325 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URGCP-MRPS24S4R325 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.18■□□□□ 0.5
URGCP-MRPS24S4R325 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URGCP-MRPS24S4R325 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
URGCP-MRPS24S4R325 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URGCP-MRPS24S4R325 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
URGCP-MRPS24S4R325 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URGCP-MRPS24S4R325 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.18■□□□□ 0.5
URGCP-MRPS24S4R325 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.17■□□□□ 0.5
URGCP-MRPS24S4R325 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
URGCP-MRPS24S4R325 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
URGCP-MRPS24S4R325 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
URGCP-MRPS24S4R325 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
URGCP-MRPS24S4R325 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
URGCP-MRPS24S4R325 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
URGCP-MRPS24S4R325 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
URGCP-MRPS24S4R325 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URGCP-MRPS24S4R325 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URGCP-MRPS24S4R325 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
URGCP-MRPS24S4R325 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URGCP-MRPS24S4R325 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URGCP-MRPS24S4R325 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URGCP-MRPS24S4R325 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
URGCP-MRPS24S4R325 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
URGCP-MRPS24S4R325 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 AL137060.1-201ENST00000618151 2648 ntBASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
URGCP-MRPS24S4R325 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
URGCP-MRPS24S4R325 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
URGCP-MRPS24S4R325 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
URGCP-MRPS24S4R325 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
URGCP-MRPS24S4R325 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.13■□□□□ 0.49
URGCP-MRPS24S4R325 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.13■□□□□ 0.49
URGCP-MRPS24S4R325 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.13■□□□□ 0.49
URGCP-MRPS24S4R325 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms