Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLCA3PQ9Y6N3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCA3PQ9Y6N3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.95■■□□□ 1.1
CLCA3PQ9Y6N3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCA3PQ9Y6N3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLCA3PQ9Y6N3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCA3PQ9Y6N3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCA3PQ9Y6N3 AC120024.1-201ENST00000562672 995 ntBASIC21.94■■□□□ 1.1
CLCA3PQ9Y6N3 AC011551.1-201ENST00000614101 683 ntBASIC21.94■■□□□ 1.1
CLCA3PQ9Y6N3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCA3PQ9Y6N3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLCA3PQ9Y6N3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCA3PQ9Y6N3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCA3PQ9Y6N3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCA3PQ9Y6N3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCA3PQ9Y6N3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCA3PQ9Y6N3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCA3PQ9Y6N3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.93■■□□□ 1.1
CLCA3PQ9Y6N3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCA3PQ9Y6N3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.93■■□□□ 1.1
CLCA3PQ9Y6N3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLCA3PQ9Y6N3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCA3PQ9Y6N3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCA3PQ9Y6N3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.92■■□□□ 1.1
CLCA3PQ9Y6N3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.92■■□□□ 1.1
CLCA3PQ9Y6N3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CLCA3PQ9Y6N3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.92■■□□□ 1.1
CLCA3PQ9Y6N3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLCA3PQ9Y6N3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.9■■□□□ 1.1
CLCA3PQ9Y6N3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.9■■□□□ 1.1
CLCA3PQ9Y6N3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCA3PQ9Y6N3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCA3PQ9Y6N3 AL451085.2-201ENST00000605085 799 ntBASIC21.9■■□□□ 1.1
CLCA3PQ9Y6N3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCA3PQ9Y6N3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCA3PQ9Y6N3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCA3PQ9Y6N3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.9■■□□□ 1.1
CLCA3PQ9Y6N3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CLCA3PQ9Y6N3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLCA3PQ9Y6N3 AC090877.2-201ENST00000558441 1738 ntBASIC21.89■■□□□ 1.1
CLCA3PQ9Y6N3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLCA3PQ9Y6N3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLCA3PQ9Y6N3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CLCA3PQ9Y6N3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCA3PQ9Y6N3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCA3PQ9Y6N3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCA3PQ9Y6N3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CLCA3PQ9Y6N3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCA3PQ9Y6N3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.88■■□□□ 1.09
CLCA3PQ9Y6N3 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.88■■□□□ 1.09
CLCA3PQ9Y6N3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCA3PQ9Y6N3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCA3PQ9Y6N3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCA3PQ9Y6N3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 AC009299.2-201ENST00000482477 511 ntBASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCA3PQ9Y6N3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCA3PQ9Y6N3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms