Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC4A7Q9Y6M7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.56■■□□□ 1.68
SLC4A7Q9Y6M7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
SLC4A7Q9Y6M7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.56■■□□□ 1.68
SLC4A7Q9Y6M7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC4A7Q9Y6M7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
SLC4A7Q9Y6M7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.55■■□□□ 1.68
SLC4A7Q9Y6M7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC4A7Q9Y6M7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC4A7Q9Y6M7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC4A7Q9Y6M7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.55■■□□□ 1.68
SLC4A7Q9Y6M7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC4A7Q9Y6M7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SLC4A7Q9Y6M7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SLC4A7Q9Y6M7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.54■■□□□ 1.68
SLC4A7Q9Y6M7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLC4A7Q9Y6M7 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.54■■□□□ 1.68
SLC4A7Q9Y6M7 AL136967.2-201ENST00000623968 743 ntBASIC25.54■■□□□ 1.68
SLC4A7Q9Y6M7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC4A7Q9Y6M7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 AF213884.3-201ENST00000563833 479 ntBASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.52■■□□□ 1.68
SLC4A7Q9Y6M7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC4A7Q9Y6M7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.51■■□□□ 1.67
SLC4A7Q9Y6M7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC4A7Q9Y6M7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC4A7Q9Y6M7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC4A7Q9Y6M7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLC4A7Q9Y6M7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLC4A7Q9Y6M7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC4A7Q9Y6M7 MIR6821-201ENST00000617625 74 ntBASIC25.5■■□□□ 1.67
SLC4A7Q9Y6M7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC4A7Q9Y6M7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC4A7Q9Y6M7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.49■■□□□ 1.67
SLC4A7Q9Y6M7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC4A7Q9Y6M7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.49■■□□□ 1.67
SLC4A7Q9Y6M7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SLC4A7Q9Y6M7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SLC4A7Q9Y6M7 FOXO3B-201ENST00000395675 1928 ntBASIC25.49■■□□□ 1.67
SLC4A7Q9Y6M7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SLC4A7Q9Y6M7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.48■■□□□ 1.67
SLC4A7Q9Y6M7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.48■■□□□ 1.67
SLC4A7Q9Y6M7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.48■■□□□ 1.67
SLC4A7Q9Y6M7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SLC4A7Q9Y6M7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.47■■□□□ 1.67
SLC4A7Q9Y6M7 MIR939-201ENST00000401314 82 ntBASIC25.47■■□□□ 1.67
SLC4A7Q9Y6M7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.47■■□□□ 1.67
SLC4A7Q9Y6M7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SLC4A7Q9Y6M7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SLC4A7Q9Y6M7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC4A7Q9Y6M7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC4A7Q9Y6M7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC4A7Q9Y6M7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC4A7Q9Y6M7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.46■■□□□ 1.67
SLC4A7Q9Y6M7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC4A7Q9Y6M7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.46■■□□□ 1.67
SLC4A7Q9Y6M7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SLC4A7Q9Y6M7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.45■■□□□ 1.67
SLC4A7Q9Y6M7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLC4A7Q9Y6M7 AC097381.1-201ENST00000429019 1296 ntBASIC25.45■■□□□ 1.66
SLC4A7Q9Y6M7 DUX4L19-201ENST00000557448 1267 ntBASIC25.45■■□□□ 1.66
SLC4A7Q9Y6M7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 AC004448.1-201ENST00000458332 883 ntBASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 AP001330.3-201ENST00000520123 633 ntBASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SLC4A7Q9Y6M7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
SLC4A7Q9Y6M7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SLC4A7Q9Y6M7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.43■■□□□ 1.66
SLC4A7Q9Y6M7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SLC4A7Q9Y6M7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
SLC4A7Q9Y6M7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.43■■□□□ 1.66
SLC4A7Q9Y6M7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SLC4A7Q9Y6M7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
SLC4A7Q9Y6M7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SLC4A7Q9Y6M7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.43■■□□□ 1.66
SLC4A7Q9Y6M7 AC091305.1-201ENST00000479476 895 ntBASIC25.42■■□□□ 1.66
SLC4A7Q9Y6M7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.42■■□□□ 1.66
SLC4A7Q9Y6M7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SLC4A7Q9Y6M7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SLC4A7Q9Y6M7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SLC4A7Q9Y6M7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
SLC4A7Q9Y6M7 AC090877.2-201ENST00000558441 1738 ntBASIC25.41■■□□□ 1.66
SLC4A7Q9Y6M7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SLC4A7Q9Y6M7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms