Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST3A1Q9Y663 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.11■■□□□ 1.29
HS3ST3A1Q9Y663 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.11■■□□□ 1.29
HS3ST3A1Q9Y663 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.11■■□□□ 1.29
HS3ST3A1Q9Y663 SNX5-217ENST00000606557 1087 ntBASIC23.11■■□□□ 1.29
HS3ST3A1Q9Y663 MIR6722-201ENST00000617286 78 ntBASIC23.11■■□□□ 1.29
HS3ST3A1Q9Y663 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HS3ST3A1Q9Y663 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.1■■□□□ 1.29
HS3ST3A1Q9Y663 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.1■■□□□ 1.29
HS3ST3A1Q9Y663 AC131281.2-201ENST00000520478 145 ntBASIC23.1■■□□□ 1.29
HS3ST3A1Q9Y663 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.1■■□□□ 1.29
HS3ST3A1Q9Y663 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
HS3ST3A1Q9Y663 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.1■■□□□ 1.29
HS3ST3A1Q9Y663 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST3A1Q9Y663 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST3A1Q9Y663 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.09■■□□□ 1.29
HS3ST3A1Q9Y663 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST3A1Q9Y663 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
HS3ST3A1Q9Y663 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST3A1Q9Y663 AC019069.1-201ENST00000610008 1333 ntBASIC23.08■■□□□ 1.29
HS3ST3A1Q9Y663 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HS3ST3A1Q9Y663 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HS3ST3A1Q9Y663 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.08■■□□□ 1.29
HS3ST3A1Q9Y663 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.08■■□□□ 1.29
HS3ST3A1Q9Y663 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HS3ST3A1Q9Y663 DUSP8P4-201ENST00000399538 1761 ntBASIC23.08■■□□□ 1.29
HS3ST3A1Q9Y663 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
HS3ST3A1Q9Y663 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.07■■□□□ 1.28
HS3ST3A1Q9Y663 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.07■■□□□ 1.28
HS3ST3A1Q9Y663 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.07■■□□□ 1.28
HS3ST3A1Q9Y663 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
HS3ST3A1Q9Y663 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HS3ST3A1Q9Y663 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
HS3ST3A1Q9Y663 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HS3ST3A1Q9Y663 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
HS3ST3A1Q9Y663 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HS3ST3A1Q9Y663 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.06■■□□□ 1.28
HS3ST3A1Q9Y663 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.06■■□□□ 1.28
HS3ST3A1Q9Y663 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.06■■□□□ 1.28
HS3ST3A1Q9Y663 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
HS3ST3A1Q9Y663 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HS3ST3A1Q9Y663 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HS3ST3A1Q9Y663 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.05■■□□□ 1.28
HS3ST3A1Q9Y663 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
HS3ST3A1Q9Y663 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HS3ST3A1Q9Y663 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HS3ST3A1Q9Y663 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HS3ST3A1Q9Y663 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HS3ST3A1Q9Y663 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
HS3ST3A1Q9Y663 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HS3ST3A1Q9Y663 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HS3ST3A1Q9Y663 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HS3ST3A1Q9Y663 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HS3ST3A1Q9Y663 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.04■■□□□ 1.28
HS3ST3A1Q9Y663 AL136116.3-201ENST00000402907 1138 ntBASIC23.04■■□□□ 1.28
HS3ST3A1Q9Y663 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.04■■□□□ 1.28
HS3ST3A1Q9Y663 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HS3ST3A1Q9Y663 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.04■■□□□ 1.28
HS3ST3A1Q9Y663 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HS3ST3A1Q9Y663 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.03■■□□□ 1.28
HS3ST3A1Q9Y663 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.03■■□□□ 1.28
HS3ST3A1Q9Y663 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.03■■□□□ 1.28
HS3ST3A1Q9Y663 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.03■■□□□ 1.28
HS3ST3A1Q9Y663 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HS3ST3A1Q9Y663 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HS3ST3A1Q9Y663 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HS3ST3A1Q9Y663 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
HS3ST3A1Q9Y663 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
HS3ST3A1Q9Y663 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HS3ST3A1Q9Y663 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.02■■□□□ 1.28
HS3ST3A1Q9Y663 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.02■■□□□ 1.28
HS3ST3A1Q9Y663 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HS3ST3A1Q9Y663 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
HS3ST3A1Q9Y663 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
HS3ST3A1Q9Y663 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.01■■□□□ 1.27
HS3ST3A1Q9Y663 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HS3ST3A1Q9Y663 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HS3ST3A1Q9Y663 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HS3ST3A1Q9Y663 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HS3ST3A1Q9Y663 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HS3ST3A1Q9Y663 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.01■■□□□ 1.27
HS3ST3A1Q9Y663 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HS3ST3A1Q9Y663 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HS3ST3A1Q9Y663 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 AC004448.1-201ENST00000458332 883 ntBASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 SLC6A10P-202ENST00000431994 2058 ntBASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23■■□□□ 1.27
HS3ST3A1Q9Y663 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
HS3ST3A1Q9Y663 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HS3ST3A1Q9Y663 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HS3ST3A1Q9Y663 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms