Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHB2Q9Y5E7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
PCDHB2Q9Y5E7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHB2Q9Y5E7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHB2Q9Y5E7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
PCDHB2Q9Y5E7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB2Q9Y5E7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHB2Q9Y5E7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB2Q9Y5E7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB2Q9Y5E7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB2Q9Y5E7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
PCDHB2Q9Y5E7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
PCDHB2Q9Y5E7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB2Q9Y5E7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB2Q9Y5E7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB2Q9Y5E7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB2Q9Y5E7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB2Q9Y5E7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB2Q9Y5E7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB2Q9Y5E7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.62■■□□□ 1.69
PCDHB2Q9Y5E7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
PCDHB2Q9Y5E7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHB2Q9Y5E7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
PCDHB2Q9Y5E7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHB2Q9Y5E7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB2Q9Y5E7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB2Q9Y5E7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB2Q9Y5E7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
PCDHB2Q9Y5E7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.61■■□□□ 1.69
PCDHB2Q9Y5E7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB2Q9Y5E7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB2Q9Y5E7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB2Q9Y5E7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHB2Q9Y5E7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHB2Q9Y5E7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHB2Q9Y5E7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
PCDHB2Q9Y5E7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB2Q9Y5E7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHB2Q9Y5E7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB2Q9Y5E7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB2Q9Y5E7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.59■■□□□ 1.69
PCDHB2Q9Y5E7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDHB2Q9Y5E7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDHB2Q9Y5E7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.58■■□□□ 1.68
PCDHB2Q9Y5E7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHB2Q9Y5E7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.57■■□□□ 1.68
PCDHB2Q9Y5E7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB2Q9Y5E7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
PCDHB2Q9Y5E7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB2Q9Y5E7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHB2Q9Y5E7 AF131216.4-201ENST00000638924 1588 ntBASIC25.56■■□□□ 1.68
PCDHB2Q9Y5E7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHB2Q9Y5E7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHB2Q9Y5E7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.56■■□□□ 1.68
PCDHB2Q9Y5E7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHB2Q9Y5E7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHB2Q9Y5E7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHB2Q9Y5E7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
PCDHB2Q9Y5E7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
PCDHB2Q9Y5E7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHB2Q9Y5E7 AC090877.2-201ENST00000558441 1738 ntBASIC25.55■■□□□ 1.68
PCDHB2Q9Y5E7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHB2Q9Y5E7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHB2Q9Y5E7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHB2Q9Y5E7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHB2Q9Y5E7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
PCDHB2Q9Y5E7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB2Q9Y5E7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB2Q9Y5E7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB2Q9Y5E7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
PCDHB2Q9Y5E7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHB2Q9Y5E7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB2Q9Y5E7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB2Q9Y5E7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.54■■□□□ 1.68
PCDHB2Q9Y5E7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.53■■□□□ 1.68
PCDHB2Q9Y5E7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHB2Q9Y5E7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PCDHB2Q9Y5E7 AC010997.5-201ENST00000609182 354 ntBASIC25.53■■□□□ 1.68
PCDHB2Q9Y5E7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHB2Q9Y5E7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHB2Q9Y5E7 AC008406.3-201ENST00000620001 1374 ntBASIC25.53■■□□□ 1.68
PCDHB2Q9Y5E7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHB2Q9Y5E7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHB2Q9Y5E7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHB2Q9Y5E7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHB2Q9Y5E7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHB2Q9Y5E7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDHB2Q9Y5E7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHB2Q9Y5E7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHB2Q9Y5E7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHB2Q9Y5E7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHB2Q9Y5E7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHB2Q9Y5E7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHB2Q9Y5E7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDHB2Q9Y5E7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHB2Q9Y5E7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDHB2Q9Y5E7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.5■■□□□ 1.67
PCDHB2Q9Y5E7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.5■■□□□ 1.67
PCDHB2Q9Y5E7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDHB2Q9Y5E7 MTDHP2-201ENST00000601468 714 ntBASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms