Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CTDP1Q9Y5B0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CTDP1Q9Y5B0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.05■■□□□ 1.92
CTDP1Q9Y5B0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.05■■□□□ 1.92
CTDP1Q9Y5B0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.05■■□□□ 1.92
CTDP1Q9Y5B0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CTDP1Q9Y5B0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.04■■□□□ 1.92
CTDP1Q9Y5B0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.04■■□□□ 1.92
CTDP1Q9Y5B0 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.04■■□□□ 1.92
CTDP1Q9Y5B0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.04■■□□□ 1.92
CTDP1Q9Y5B0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.04■■□□□ 1.92
CTDP1Q9Y5B0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CTDP1Q9Y5B0 AL117332.1-201ENST00000622628 974 ntBASIC27.04■■□□□ 1.92
CTDP1Q9Y5B0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CTDP1Q9Y5B0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.03■■□□□ 1.92
CTDP1Q9Y5B0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.03■■□□□ 1.92
CTDP1Q9Y5B0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.03■■□□□ 1.92
CTDP1Q9Y5B0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
CTDP1Q9Y5B0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.03■■□□□ 1.92
CTDP1Q9Y5B0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.03■■□□□ 1.92
CTDP1Q9Y5B0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
CTDP1Q9Y5B0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CTDP1Q9Y5B0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.92
CTDP1Q9Y5B0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CTDP1Q9Y5B0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
CTDP1Q9Y5B0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.01■■□□□ 1.91
CTDP1Q9Y5B0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.01■■□□□ 1.91
CTDP1Q9Y5B0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
CTDP1Q9Y5B0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CTDP1Q9Y5B0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.01■■□□□ 1.91
CTDP1Q9Y5B0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CTDP1Q9Y5B0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CTDP1Q9Y5B0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CTDP1Q9Y5B0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27■■□□□ 1.91
CTDP1Q9Y5B0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27■■□□□ 1.91
CTDP1Q9Y5B0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CTDP1Q9Y5B0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.99■■□□□ 1.91
CTDP1Q9Y5B0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.99■■□□□ 1.91
CTDP1Q9Y5B0 AC131281.2-201ENST00000520478 145 ntBASIC26.99■■□□□ 1.91
CTDP1Q9Y5B0 MIR3621-201ENST00000580529 85 ntBASIC26.99■■□□□ 1.91
CTDP1Q9Y5B0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.99■■□□□ 1.91
CTDP1Q9Y5B0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 AL136116.3-201ENST00000402907 1138 ntBASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CTDP1Q9Y5B0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CTDP1Q9Y5B0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.97■■□□□ 1.91
CTDP1Q9Y5B0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CTDP1Q9Y5B0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.97■■□□□ 1.91
CTDP1Q9Y5B0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CTDP1Q9Y5B0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CTDP1Q9Y5B0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.96■■□□□ 1.91
CTDP1Q9Y5B0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CTDP1Q9Y5B0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
CTDP1Q9Y5B0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.95■■□□□ 1.9
CTDP1Q9Y5B0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
CTDP1Q9Y5B0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CTDP1Q9Y5B0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CTDP1Q9Y5B0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.94■■□□□ 1.9
CTDP1Q9Y5B0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CTDP1Q9Y5B0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CTDP1Q9Y5B0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CTDP1Q9Y5B0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
CTDP1Q9Y5B0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CTDP1Q9Y5B0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CTDP1Q9Y5B0 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.94■■□□□ 1.9
CTDP1Q9Y5B0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CTDP1Q9Y5B0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CTDP1Q9Y5B0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.93■■□□□ 1.9
CTDP1Q9Y5B0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CTDP1Q9Y5B0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CTDP1Q9Y5B0 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.93■■□□□ 1.9
CTDP1Q9Y5B0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.93■■□□□ 1.9
CTDP1Q9Y5B0 SNX5-217ENST00000606557 1087 ntBASIC26.93■■□□□ 1.9
CTDP1Q9Y5B0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.92■■□□□ 1.9
CTDP1Q9Y5B0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.92■■□□□ 1.9
CTDP1Q9Y5B0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CTDP1Q9Y5B0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.92■■□□□ 1.9
CTDP1Q9Y5B0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CTDP1Q9Y5B0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CTDP1Q9Y5B0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CTDP1Q9Y5B0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CTDP1Q9Y5B0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms