Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.49■■□□□ 1.03
NPIPA1Q9UND3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.49■■□□□ 1.03
NPIPA1Q9UND3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.49■■□□□ 1.03
NPIPA1Q9UND3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.49■■□□□ 1.03
NPIPA1Q9UND3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPA1Q9UND3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.49■■□□□ 1.03
NPIPA1Q9UND3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPA1Q9UND3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA1Q9UND3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NPIPA1Q9UND3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.47■■□□□ 1.03
NPIPA1Q9UND3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
NPIPA1Q9UND3 MIR4281-201ENST00000580852 62 ntBASIC21.47■■□□□ 1.03
NPIPA1Q9UND3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPA1Q9UND3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPA1Q9UND3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NPIPA1Q9UND3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPA1Q9UND3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPA1Q9UND3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPA1Q9UND3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.46■■□□□ 1.03
NPIPA1Q9UND3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
NPIPA1Q9UND3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.46■■□□□ 1.03
NPIPA1Q9UND3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPA1Q9UND3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.45■■□□□ 1.02
NPIPA1Q9UND3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.45■■□□□ 1.02
NPIPA1Q9UND3 AC019069.1-201ENST00000610008 1333 ntBASIC21.45■■□□□ 1.02
NPIPA1Q9UND3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPA1Q9UND3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPA1Q9UND3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NPIPA1Q9UND3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPA1Q9UND3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.44■■□□□ 1.02
NPIPA1Q9UND3 AC092028.1-203ENST00000608262 953 ntBASIC21.44■■□□□ 1.02
NPIPA1Q9UND3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPA1Q9UND3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPA1Q9UND3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPA1Q9UND3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPA1Q9UND3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
NPIPA1Q9UND3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
NPIPA1Q9UND3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NPIPA1Q9UND3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPIPA1Q9UND3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPIPA1Q9UND3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NPIPA1Q9UND3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPA1Q9UND3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPA1Q9UND3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPA1Q9UND3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPA1Q9UND3 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.41■■□□□ 1.02
NPIPA1Q9UND3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPA1Q9UND3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPIPA1Q9UND3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NPIPA1Q9UND3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.4■■□□□ 1.02
NPIPA1Q9UND3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.4■■□□□ 1.02
NPIPA1Q9UND3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.4■■□□□ 1.02
NPIPA1Q9UND3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
NPIPA1Q9UND3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPA1Q9UND3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPA1Q9UND3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.4■■□□□ 1.02
NPIPA1Q9UND3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPIPA1Q9UND3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.39■■□□□ 1.01
NPIPA1Q9UND3 AC011551.1-201ENST00000614101 683 ntBASIC21.39■■□□□ 1.01
NPIPA1Q9UND3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
NPIPA1Q9UND3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.39■■□□□ 1.01
NPIPA1Q9UND3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPA1Q9UND3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPA1Q9UND3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPA1Q9UND3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPA1Q9UND3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPA1Q9UND3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.38■■□□□ 1.01
NPIPA1Q9UND3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.38■■□□□ 1.01
NPIPA1Q9UND3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.38■■□□□ 1.01
NPIPA1Q9UND3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPA1Q9UND3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPA1Q9UND3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.37■■□□□ 1.01
NPIPA1Q9UND3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPA1Q9UND3 AC097639.1-201ENST00000565519 1891 ntBASIC21.37■■□□□ 1.01
NPIPA1Q9UND3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPA1Q9UND3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPA1Q9UND3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPA1Q9UND3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms