Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
GAR1Q9NY12 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.74■□□□□ 0.59
GAR1Q9NY12 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.73■□□□□ 0.59
GAR1Q9NY12 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAR1Q9NY12 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAR1Q9NY12 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAR1Q9NY12 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAR1Q9NY12 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.73■□□□□ 0.59
GAR1Q9NY12 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.73■□□□□ 0.59
GAR1Q9NY12 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GAR1Q9NY12 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.73■□□□□ 0.59
GAR1Q9NY12 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.73■□□□□ 0.59
GAR1Q9NY12 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GAR1Q9NY12 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
GAR1Q9NY12 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAR1Q9NY12 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
GAR1Q9NY12 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAR1Q9NY12 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
GAR1Q9NY12 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GAR1Q9NY12 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAR1Q9NY12 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.72■□□□□ 0.59
GAR1Q9NY12 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GAR1Q9NY12 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAR1Q9NY12 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GAR1Q9NY12 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.71■□□□□ 0.59
GAR1Q9NY12 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GAR1Q9NY12 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
GAR1Q9NY12 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 GPX1-201ENST00000419349 1106 ntBASIC18.71■□□□□ 0.59
GAR1Q9NY12 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.71■□□□□ 0.59
GAR1Q9NY12 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GAR1Q9NY12 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GAR1Q9NY12 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.71■□□□□ 0.59
GAR1Q9NY12 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.71■□□□□ 0.59
GAR1Q9NY12 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAR1Q9NY12 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.7■□□□□ 0.58
GAR1Q9NY12 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.7■□□□□ 0.58
GAR1Q9NY12 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAR1Q9NY12 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GAR1Q9NY12 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GAR1Q9NY12 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.7■□□□□ 0.58
GAR1Q9NY12 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.7■□□□□ 0.58
GAR1Q9NY12 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
GAR1Q9NY12 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GAR1Q9NY12 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.7■□□□□ 0.58
GAR1Q9NY12 AL139125.2-201ENST00000623134 1869 ntBASIC18.7■□□□□ 0.58
GAR1Q9NY12 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAR1Q9NY12 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GAR1Q9NY12 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAR1Q9NY12 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GAR1Q9NY12 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.69■□□□□ 0.58
GAR1Q9NY12 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAR1Q9NY12 PKD1P6-201ENST00000343738 4769 ntBASIC18.69■□□□□ 0.58
GAR1Q9NY12 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.69■□□□□ 0.58
GAR1Q9NY12 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.69■□□□□ 0.58
GAR1Q9NY12 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GAR1Q9NY12 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.69■□□□□ 0.58
GAR1Q9NY12 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAR1Q9NY12 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAR1Q9NY12 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
GAR1Q9NY12 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GAR1Q9NY12 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GAR1Q9NY12 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.68■□□□□ 0.58
GAR1Q9NY12 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GAR1Q9NY12 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.67■□□□□ 0.58
GAR1Q9NY12 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GAR1Q9NY12 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.67■□□□□ 0.58
GAR1Q9NY12 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.67■□□□□ 0.58
GAR1Q9NY12 RP9P-202ENST00000450133 1212 ntBASIC18.67■□□□□ 0.58
GAR1Q9NY12 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.67■□□□□ 0.58
GAR1Q9NY12 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAR1Q9NY12 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GAR1Q9NY12 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAR1Q9NY12 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GAR1Q9NY12 AC142381.3-201ENST00000568208 1670 ntBASIC18.66■□□□□ 0.58
GAR1Q9NY12 KRT18P10-201ENST00000388836 1287 ntBASIC18.66■□□□□ 0.58
GAR1Q9NY12 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GAR1Q9NY12 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
GAR1Q9NY12 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GAR1Q9NY12 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
GAR1Q9NY12 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.66■□□□□ 0.58
GAR1Q9NY12 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GAR1Q9NY12 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GAR1Q9NY12 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GAR1Q9NY12 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GAR1Q9NY12 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GAR1Q9NY12 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GAR1Q9NY12 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GAR1Q9NY12 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GAR1Q9NY12 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.65■□□□□ 0.58
GAR1Q9NY12 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms